RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CD209Q9NNX6 404 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 IFNKQ9P0W0 207 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 MYH7P12883 1935 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 CTAGE5O15320 804 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 SRBD1Q8N5C6 995 aaKnown RBP15.94■□□□□ 0.14
TRIM4-201ENST00000349062 EPSTI1Q96J88 318 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 POLLQ9UGP5 575 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 SERTAD1Q9UHV2 236 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 ANKRD36CQ5JPF3 1778 aa15.94■□□□□ 0.14
TRIM4-201ENST00000349062 BAG3O95817 575 aa15.93■□□□□ 0.14
TRIM4-201ENST00000349062 ATP1A3P13637 1013 aa15.93■□□□□ 0.14
TRIM4-201ENST00000349062 STX17P56962 302 aa15.93■□□□□ 0.14
TRIM4-201ENST00000349062 TCP10Q12799 353 aa15.93■□□□□ 0.14
TRIM4-201ENST00000349062 SEC23AQ15436 765 aa15.93■□□□□ 0.14
TRIM4-201ENST00000349062 SPTY2D1Q68D10 685 aaPredicted RBP15.93■□□□□ 0.14
TRIM4-201ENST00000349062 KRI1Q8N9T8 703 aaKnown RBP15.93■□□□□ 0.14
TRIM4-201ENST00000349062 NAT10Q9H0A0 1025 aaKnown RBP15.93■□□□□ 0.14
TRIM4-201ENST00000349062 FAM196BA6NMK8 535 aa15.93■□□□□ 0.14
TRIM4-201ENST00000349062 MPHOSPH10O00566 681 aaKnown RBP15.93■□□□□ 0.14
TRIM4-201ENST00000349062 ZSCAN20P17040 1043 aaPredicted RBP15.93■□□□□ 0.14
TRIM4-201ENST00000349062 DHX8Q14562 1220 aaKnown RBP15.93■□□□□ 0.14
TRIM4-201ENST00000349062 TICAM2Q86XR7 235 aa15.93■□□□□ 0.14
TRIM4-201ENST00000349062 DBNDD1Q9H9R9 158 aa15.93■□□□□ 0.14
TRIM4-201ENST00000349062 SERPINC1P01008 464 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 TMC6Q7Z403 805 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 PNMA1Q8ND90 353 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 WDR66Q8TBY9 1149 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 ATRNO75882 1429 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 CMA1P23946 247 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 NAA30Q147X3 362 aaPredicted RBP15.92■□□□□ 0.14
TRIM4-201ENST00000349062 RBM17Q96I25 401 aaKnown RBP15.92■□□□□ 0.14
TRIM4-201ENST00000349062 UBA5Q9GZZ9 404 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 CSRNP2Q9H175 543 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 PCDHA5Q9Y5H7 936 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 CDK11BP21127 795 aaKnown RBP15.92■□□□□ 0.14
TRIM4-201ENST00000349062 FBXL16Q8N461 479 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 SHISA4Q96DD7 197 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 BRIP1Q9BX63 1249 aa15.92■□□□□ 0.14
TRIM4-201ENST00000349062 ZC3H12CQ9C0D7 883 aaKnown RBP15.92■□□□□ 0.14
TRIM4-201ENST00000349062 RTL9Q8NET4 1388 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 KRT2P35908 639 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 IQCB1Q15051 598 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 ATL3Q6DD88 541 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 SMYD4Q8IYR2 804 aaPredicted RBP15.91■□□□□ 0.14
TRIM4-201ENST00000349062 CACTINQ8WUQ7 758 aaKnown RBP15.91■□□□□ 0.14
TRIM4-201ENST00000349062 KCNQ5Q9NR82 932 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 WDR19Q8NEZ3 1342 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 TRIM75PA6NK02 468 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 TROAPQ12815 778 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
TRIM4-201ENST00000349062 PTPAQ15257 358 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 USP17L2Q6R6M4 530 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 ZSCAN29Q8IWY8 852 aaPredicted RBP15.91■□□□□ 0.14
TRIM4-201ENST00000349062 DHX40Q8IX18 779 aaKnown RBP15.91■□□□□ 0.14
TRIM4-201ENST00000349062 BRMS1Q9HCU9 246 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.91■□□□□ 0.14
TRIM4-201ENST00000349062 MAPK8IP1Q9UQF2 711 aa15.91■□□□□ 0.14
TRIM4-201ENST00000349062 V9GYY5 206 aaPredicted RBP15.91■□□□□ 0.14
TRIM4-201ENST00000349062 MMP10P09238 476 aa15.9■□□□□ 0.14
TRIM4-201ENST00000349062 DMTNQ08495 405 aa15.9■□□□□ 0.14
TRIM4-201ENST00000349062 SPATA31A6Q5VVP1 1343 aa15.9■□□□□ 0.14
TRIM4-201ENST00000349062 FRMPD2Q68DX3 1309 aaPredicted RBP15.9■□□□□ 0.14
TRIM4-201ENST00000349062 MYH13Q9UKX3 1938 aa15.9■□□□□ 0.14
TRIM4-201ENST00000349062 CFAP100Q494V2 611 aa15.9■□□□□ 0.14
TRIM4-201ENST00000349062 TDRD7Q8NHU6 1098 aaKnown RBP15.9■□□□□ 0.14
TRIM4-201ENST00000349062 XPO4Q9C0E2 1151 aaKnown RBP15.9■□□□□ 0.14
TRIM4-201ENST00000349062 TMX4Q9H1E5 349 aaPredicted RBP15.9■□□□□ 0.14
TRIM4-201ENST00000349062 BLZF1Q9H2G9 400 aa15.9■□□□□ 0.14
TRIM4-201ENST00000349062 TPD52L1Q16890 204 aaPredicted RBP15.9■□□□□ 0.14
TRIM4-201ENST00000349062 KIAA0825Q8IV33 1275 aa15.9■□□□□ 0.14
TRIM4-201ENST00000349062 LRRC47Q8N1G4 583 aaKnown RBP15.9■□□□□ 0.14
TRIM4-201ENST00000349062 MAP3K14Q99558 947 aa15.9■□□□□ 0.14
TRIM4-201ENST00000349062 ATP8A2Q9NTI2 1148 aa15.9■□□□□ 0.14
TRIM4-201ENST00000349062 A0A1W2PQ27 194 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 A0A1W2PQ64 194 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 A0A1W2PQD8 194 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 PKN1Q16512 942 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 EEF2KMTQ96G04 330 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 PROM2Q8N271 834 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 TBC1D16Q8TBP0 767 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 ARPP21Q9UBL0 812 aaPredicted RBP15.89■□□□□ 0.13
TRIM4-201ENST00000349062 TTF2Q9UNY4 1162 aaKnown RBP15.89■□□□□ 0.13
TRIM4-201ENST00000349062 LEMD3Q9Y2U8 911 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 NRAPQ86VF7 1730 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 TMX1Q9H3N1 280 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 PCDHAC2Q9Y5I4 1007 aa15.89■□□□□ 0.13
TRIM4-201ENST00000349062 DDX60Q8IY21 1712 aaKnown RBP15.89■□□□□ 0.13
TRIM4-201ENST00000349062 EYA3Q99504 573 aa15.88■□□□□ 0.13
TRIM4-201ENST00000349062 IL17RBQ9NRM6 502 aa15.88■□□□□ 0.13
TRIM4-201ENST00000349062 COL22A1Q8NFW1 1626 aaPredicted RBP15.88■□□□□ 0.13
TRIM4-201ENST00000349062 PTGDRQ13258 359 aa15.88■□□□□ 0.13
TRIM4-201ENST00000349062 RILPL1Q5EBL4 403 aa15.88■□□□□ 0.13
TRIM4-201ENST00000349062 METTL16Q86W50 562 aaKnown RBP15.88■□□□□ 0.13
TRIM4-201ENST00000349062 FOXP4Q8IVH2 680 aaPredicted RBP15.88■□□□□ 0.13
TRIM4-201ENST00000349062 FAM177A1Q8N128 213 aaPredicted RBP15.88■□□□□ 0.13
TRIM4-201ENST00000349062 GPCPD1Q9NPB8 672 aa15.88■□□□□ 0.13
TRIM4-201ENST00000349062 PES1O00541 588 aaKnown RBP15.87■□□□□ 0.13
TRIM4-201ENST00000349062 PPEF1O14829 653 aaPredicted RBP15.87■□□□□ 0.13
TRIM4-201ENST00000349062 SEMA3EO15041 775 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms