RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 FILIP1LQ4L180 1135 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 LRCH2Q5VUJ6 765 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 KRT40Q6A162 431 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 SLC26A6Q9BXS9 759 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 DONSONQ9NYP3 566 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 NAP1L1P55209 391 aaKnown RBP17.1■□□□□ 0.33
PTBP1-201ENST00000349038 COPS6Q7L5N1 327 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 NUTM2AQ8IVF1 878 aaPredicted RBP17.1■□□□□ 0.33
PTBP1-201ENST00000349038 BLZF1Q9H2G9 400 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 PPANQ9NQ55 473 aaKnown RBP17.1■□□□□ 0.33
PTBP1-201ENST00000349038 BCCIPQ9P287 314 aaKnown RBP eCLIP17.1■□□□□ 0.33
PTBP1-201ENST00000349038 APBA1Q02410 837 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 BIRC2Q13490 618 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 LRP10Q7Z4F1 713 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 FCHSD1Q86WN1 690 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 FBXL16Q8N461 479 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 POLR3EQ9NVU0 708 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 EHD2Q9NZN4 543 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 ODF2LQ9ULJ1 636 aa17.1■□□□□ 0.33
PTBP1-201ENST00000349038 GUCY1A3Q02108 690 aa17.09■□□□□ 0.33
PTBP1-201ENST00000349038 SLC39A14Q15043 492 aa17.09■□□□□ 0.33
PTBP1-201ENST00000349038 IFT81Q8WYA0 676 aa17.09■□□□□ 0.33
PTBP1-201ENST00000349038 CABS1Q96KC9 395 aa17.09■□□□□ 0.33
PTBP1-201ENST00000349038 SEC31BQ9NQW1 1179 aa17.09■□□□□ 0.33
PTBP1-201ENST00000349038 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
PTBP1-201ENST00000349038 KRT14P02533 472 aa17.09■□□□□ 0.33
PTBP1-201ENST00000349038 ZMYM1Q5SVZ6 1142 aa17.09■□□□□ 0.33
PTBP1-201ENST00000349038 ARHGEF25Q86VW2 580 aa17.09■□□□□ 0.33
PTBP1-201ENST00000349038 HDAC7Q8WUI4 952 aa17.09■□□□□ 0.33
PTBP1-201ENST00000349038 BTBD18B2RXH4 712 aa17.08■□□□□ 0.33
PTBP1-201ENST00000349038 RNF225M0QZC1 329 aaPredicted RBP17.08■□□□□ 0.33
PTBP1-201ENST00000349038 MMP14P50281 582 aa17.08■□□□□ 0.33
PTBP1-201ENST00000349038 CLNS1AP54105 237 aaKnown RBP17.08■□□□□ 0.33
PTBP1-201ENST00000349038 CYP27A1Q02318 531 aa17.08■□□□□ 0.33
PTBP1-201ENST00000349038 ZNF790Q6PG37 636 aa17.08■□□□□ 0.33
PTBP1-201ENST00000349038 ARL8AQ96BM9 186 aa17.08■□□□□ 0.33
PTBP1-201ENST00000349038 ZNF594Q96JF6 807 aaPredicted RBP17.08■□□□□ 0.33
PTBP1-201ENST00000349038 CEP89Q96ST8 783 aa17.08■□□□□ 0.33
PTBP1-201ENST00000349038 ESYT3A0FGR9 886 aa17.08■□□□□ 0.32
PTBP1-201ENST00000349038 SUGP1Q8IWZ8 645 aaKnown RBP17.08■□□□□ 0.32
PTBP1-201ENST00000349038 SMCR8Q8TEV9 937 aaPredicted RBP17.08■□□□□ 0.32
PTBP1-201ENST00000349038 ANKRD24Q8TF21 1146 aa17.08■□□□□ 0.32
PTBP1-201ENST00000349038 HNRNPLLQ8WVV9 542 aaKnown RBP17.08■□□□□ 0.32
PTBP1-201ENST00000349038 ZKSCAN3Q9BRR0 538 aa17.08■□□□□ 0.32
PTBP1-201ENST00000349038 SENP2Q9HC62 589 aa17.08■□□□□ 0.32
PTBP1-201ENST00000349038 RAB21Q9UL25 225 aa17.08■□□□□ 0.32
PTBP1-201ENST00000349038 ANKRD13CQ8N6S4 541 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 MSANTD4Q8NCY6 345 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 CCDC114Q96M63 670 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 CTNND2Q9UQB3 1225 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 DUSP10Q9Y6W6 482 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 MYBL1P10243 752 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 GUCY2FP51841 1108 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 PTPROQ16827 1216 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 ANKRD13DQ6ZTN6 518 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 COG1Q8WTW3 980 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 PAG1Q9NWQ8 432 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 SLIT3O75094 1523 aa17.07■□□□□ 0.32
PTBP1-201ENST00000349038 PDHBP11177 359 aa17.06■□□□□ 0.32
PTBP1-201ENST00000349038 METAP2P50579 478 aaKnown RBP eCLIP17.06■□□□□ 0.323e-8■■□□□ 14.5
PTBP1-201ENST00000349038 TSR1Q2NL82 804 aaKnown RBP17.06■□□□□ 0.32
PTBP1-201ENST00000349038 NUP133Q8WUM0 1156 aa17.06■□□□□ 0.32
PTBP1-201ENST00000349038 NBPF3Q9H094 633 aa17.06■□□□□ 0.32
PTBP1-201ENST00000349038 IFIT1P09914 478 aaKnown RBP17.06■□□□□ 0.32
PTBP1-201ENST00000349038 CASP7P55210 303 aa17.06■□□□□ 0.32
PTBP1-201ENST00000349038 ERVK-24P63145 666 aa17.06■□□□□ 0.32
PTBP1-201ENST00000349038 PI16Q6UXB8 463 aa17.06■□□□□ 0.32
PTBP1-201ENST00000349038 PLCD4Q9BRC7 762 aa17.06■□□□□ 0.32
PTBP1-201ENST00000349038 SAR1BQ9Y6B6 198 aa17.06■□□□□ 0.32
PTBP1-201ENST00000349038 IDEP14735 1019 aa17.05■□□□□ 0.32
PTBP1-201ENST00000349038 GBP2P32456 591 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-201ENST00000349038 CEP85LQ5SZL2 805 aa17.05■□□□□ 0.32
PTBP1-201ENST00000349038 ZNF622Q969S3 477 aaKnown RBP eCLIP17.05■□□□□ 0.321e-20■□□□□ 8.4
PTBP1-201ENST00000349038 MAST3O60307 1309 aa17.05■□□□□ 0.32
PTBP1-201ENST00000349038 NR5A1Q13285 461 aa17.05■□□□□ 0.32
PTBP1-201ENST00000349038 JAKMIP2Q96AA8 810 aa17.05■□□□□ 0.32
PTBP1-201ENST00000349038 TUBE1Q9UJT0 475 aa17.05■□□□□ 0.32
PTBP1-201ENST00000349038 HGSO14964 777 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-201ENST00000349038 GCP02774 474 aa17.05■□□□□ 0.32
PTBP1-201ENST00000349038 SF3B2Q13435 895 aaKnown RBP17.05■□□□□ 0.32
PTBP1-201ENST00000349038 ENOX2Q16206 610 aaKnown RBP17.05■□□□□ 0.32
PTBP1-201ENST00000349038 RASSF8Q8NHQ8 419 aa17.05■□□□□ 0.32
PTBP1-201ENST00000349038 CERKQ8TCT0 537 aa17.05■□□□□ 0.32
PTBP1-201ENST00000349038 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
PTBP1-201ENST00000349038 GOLGA6L7A0A1B0GV03 622 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 E7EVH7 732 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 USP5P45974 858 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 IMMTQ16891 758 aaKnown RBP17.04■□□□□ 0.32
PTBP1-201ENST00000349038 BRAPQ7Z569 592 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 MED15Q96RN5 788 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 M0R2C6 588 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 MYO1BO43795 1136 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 MFAP3LO75121 409 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 GYPCP04921 128 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 UBXN1Q04323 297 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 TBX2Q13207 712 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-201ENST00000349038 LMBR1LQ6UX01 489 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 PROCA1Q8NCQ7 364 aaPredicted RBP17.04■□□□□ 0.32
PTBP1-201ENST00000349038 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
PTBP1-201ENST00000349038 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms