RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 VPS16Q9H269 839 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 GREM2Q9H772 168 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 LZTFL1Q9NQ48 299 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 KCNJ14Q9UNX9 436 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 OPA1O60313 960 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 GABPB2Q8TAK5 448 aaPredicted RBP17.2■□□□□ 0.34
PTPRO-202ENST00000348962 EAF2Q96CJ1 260 aaPredicted RBP17.2■□□□□ 0.34
PTPRO-202ENST00000348962 MAPK8IP1Q9UQF2 711 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 VAV2P52735 878 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 KCTD2Q14681 263 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 SLFN13Q68D06 897 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
PTPRO-202ENST00000348962 PRPF6O94906 941 aaKnown RBP17.2■□□□□ 0.34
PTPRO-202ENST00000348962 ERCC5P28715 1186 aaPredicted RBP17.2■□□□□ 0.34
PTPRO-202ENST00000348962 YWHAEP62258 255 aaKnown RBP17.19■□□□□ 0.34
PTPRO-202ENST00000348962 ZNF569Q5MCW4 686 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 METTL13Q8N6R0 699 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 FBF1Q8TES7 1133 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 NUP58Q9BVL2 599 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 CFAP74Q9C0B2 1584 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 KLRF2D3W0D1 207 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 CFAP58Q5T655 872 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 SDR42E1Q8WUS8 393 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 NBPF3Q9H094 633 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 THRAP3Q9Y2W1 955 aaKnown RBP17.19■□□□□ 0.34
PTPRO-202ENST00000348962 FAM135BQ49AJ0 1406 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 MLH3Q9UHC1 1453 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 hCG_1642624A0A1W2PR95 340 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 BCRP11274 1271 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 NOLC1Q14978 699 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTPRO-202ENST00000348962 CCDC93Q567U6 631 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 IGSF22Q8N9C0 903 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 ADPGKQ9BRR6 497 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 E7EVH7 732 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 H0YCG3 227 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 UBE3CQ15386 1083 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 HAUS2Q9NVX0 235 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 AATKQ6ZMQ8 1374 aa17.19■□□□□ 0.34
PTPRO-202ENST00000348962 STK10O94804 968 aaKnown RBP17.18■□□□□ 0.34
PTPRO-202ENST00000348962 SLU7O95391 586 aaKnown RBP17.18■□□□□ 0.34
PTPRO-202ENST00000348962 LRRC24Q50LG9 513 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 DCUN1D2Q6PH85 259 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 EDC3Q96F86 508 aaKnown RBP17.18■□□□□ 0.34
PTPRO-202ENST00000348962 TUBBP07437 444 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 KARSQ15046 597 aaKnown RBP17.18■□□□□ 0.34
PTPRO-202ENST00000348962 ASIC2Q16515 512 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 KRT26Q7Z3Y9 468 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 ZNF830Q96NB3 372 aaPredicted RBP17.18■□□□□ 0.34
PTPRO-202ENST00000348962 HAUS7Q99871 368 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 PCDHB13Q9Y5F0 798 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 UGGT1Q9NYU2 1555 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 HSPA4P34932 840 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 BAG1Q99933 345 aaPredicted RBP17.18■□□□□ 0.34
PTPRO-202ENST00000348962 ABCA5Q8WWZ7 1642 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 TNNI1P19237 187 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 TMOD1P28289 359 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 GALNT17Q6IS24 598 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 LRRC47Q8N1G4 583 aaKnown RBP17.18■□□□□ 0.34
PTPRO-202ENST00000348962 FANCBQ8NB91 859 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 CAPZA3Q96KX2 299 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 PODXL2Q9NZ53 605 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 TNKSO95271 1327 aa17.18■□□□□ 0.34
PTPRO-202ENST00000348962 RAD51AP2Q09MP3 1159 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 RASA3Q14644 834 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 CCDC84Q86UT8 332 aaPredicted RBP17.17■□□□□ 0.34
PTPRO-202ENST00000348962 BLIDQ8IZY5 108 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 PROCA1Q8NCQ7 364 aaPredicted RBP17.17■□□□□ 0.34
PTPRO-202ENST00000348962 CCDC26Q8TAB7 109 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 NSMCE1Q8WV22 266 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 SYNRGQ9UMZ2 1314 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 TMEM232C9JQI7 657 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 FOSP01100 380 aaPredicted RBP17.17■□□□□ 0.34
PTPRO-202ENST00000348962 SLC9C1Q4G0N8 1177 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 FAM182BQ5T319 152 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 DPP9Q86TI2 863 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 GPR161Q8N6U8 529 aaKnown RBP17.17■□□□□ 0.34
PTPRO-202ENST00000348962 ZNF274Q96GC6 653 aaPredicted RBP17.17■□□□□ 0.34
PTPRO-202ENST00000348962 CSRNP1Q96S65 589 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 ERBB3P21860 1342 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 USP14P54578 494 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 CIAO1O76071 339 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 CEP128Q6ZU80 1094 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 CCDC25Q86WR0 208 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 RNF169Q8NCN4 708 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 SWAP70Q9UH65 585 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 PCDHA12Q9UN75 941 aa17.17■□□□□ 0.34
PTPRO-202ENST00000348962 BLMP54132 1417 aaPredicted RBP17.16■□□□□ 0.34
PTPRO-202ENST00000348962 ZNF202O95125 648 aa17.16■□□□□ 0.34
PTPRO-202ENST00000348962 PRR16Q569H4 304 aa17.16■□□□□ 0.34
PTPRO-202ENST00000348962 ARMC9Q7Z3E5 817 aa17.16■□□□□ 0.34
PTPRO-202ENST00000348962 SLFN12Q8IYM2 578 aa17.16■□□□□ 0.34
PTPRO-202ENST00000348962 TBC1D7Q9P0N9 293 aa17.16■□□□□ 0.34
PTPRO-202ENST00000348962 STIM2Q9P246 746 aa17.16■□□□□ 0.34
PTPRO-202ENST00000348962 ODF2LQ9ULJ1 636 aa17.16■□□□□ 0.34
PTPRO-202ENST00000348962 NELFCDQ8IXH7 590 aa17.16■□□□□ 0.34
PTPRO-202ENST00000348962 UIMC1Q96RL1 719 aa17.16■□□□□ 0.34
PTPRO-202ENST00000348962 GPR108Q9NPR9 543 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms