RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 PUM3Q15397 648 aaKnown RBP11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ZNF827Q17R98 1081 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MAP9Q49MG5 647 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 RAD9BQ6WBX8 426 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 GOLGA6L1Q8N7Z2 621 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 LPIN2Q92539 896 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 FAM89AQ96GI7 184 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ANKZF1Q9H8Y5 726 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 SENP2Q9HC62 589 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 FEZ2Q9UHY8 353 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 PCDHB6Q9Y5E3 794 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MYH6P13533 1939 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MROH5Q6ZUA9 1318 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CTSWP56202 376 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 APTXQ7Z2E3 356 aaKnown RBP11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 SH3RF1Q7Z6J0 888 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 ZCCHC17Q9NP64 241 aaKnown RBP11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 MKRN1Q9UHC7 482 aaKnown RBP11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 TAOK2Q9UL54 1235 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 L1RE1Q9UN81 338 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 KCNJ14Q9UNX9 436 aa11.47□□□□□ -0.57
TRAPPC6B-202ENST00000347691 DOCK2Q92608 1830 aa11.46□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CAPN2P17655 700 aa11.46□□□□□ -0.57
TRAPPC6B-202ENST00000347691 PTPN21Q16825 1174 aa11.46□□□□□ -0.57
TRAPPC6B-202ENST00000347691 VGLL2Q8N8G2 317 aa11.46□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CCDC148Q8NFR7 591 aa11.46□□□□□ -0.57
TRAPPC6B-202ENST00000347691 TTLL11Q8NHH1 800 aa11.46□□□□□ -0.57
TRAPPC6B-202ENST00000347691 CTCFLQ8NI51 663 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC6B-202ENST00000347691 DENND2AQ9ULE3 1009 aa11.46□□□□□ -0.57
TRAPPC6B-202ENST00000347691 PNPLA7Q6ZV29 1317 aa11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 SLC5A1P13866 664 aa11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 KRT2P35908 639 aa11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 MTF1Q14872 753 aa11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 GIGYF2Q6Y7W6 1299 aaKnown RBP11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 FANCBQ8NB91 859 aa11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 RPGRIP1Q96KN7 1286 aa11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 UBAC1Q9BSL1 405 aa11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 PDE11AQ9HCR9 933 aa11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 RMND1Q9NWS8 449 aa11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 LIMA1Q9UHB6 759 aaKnown RBP11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 PUF60Q9UHX1 559 aaKnown RBP11.46□□□□□ -0.58
TRAPPC6B-202ENST00000347691 TEX33O43247 280 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 MBD4O95243 580 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 STARD3NLO95772 234 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 TDO2P48775 406 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CHRNA2Q15822 529 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 PAGE5Q96GU1 130 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 VIPAS39Q9H9C1 493 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CABP5Q9NP86 173 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 VPS18Q9P253 973 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 H3BQF6 201 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CASP14P31944 242 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 GRIN1Q05586 938 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 DPYDQ12882 1025 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 MCM6Q14566 821 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 WDR93Q6P2C0 686 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CTR9Q6PD62 1173 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 ZNF654Q8IZM8 581 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 EHBP1Q8NDI1 1231 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 TOMM22Q9NS69 142 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 LRRC10BA6NIK2 292 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 KLHL10Q6JEL2 608 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 GRAMD1CQ8IYS0 662 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 SLC35F6Q8N357 371 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 SPATA5Q8NB90 893 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CPLX3Q8WVH0 158 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CCDC85AQ96PX6 553 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 MED15Q96RN5 788 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 EPB41L4AQ9HCS5 686 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 RBM28Q9NW13 759 aaKnown RBP11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 RWDD2AQ9UIY3 292 aa11.45□□□□□ -0.58
TRAPPC6B-202ENST00000347691 ANKRD36CQ5JPF3 1778 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 N4BP3O15049 544 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 GUCY1A2P33402 732 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 GREM2Q9H772 168 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 ZSWIM4Q9H7M6 989 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 PDE8AO60658 829 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 GYPCP04921 128 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CALM1P0DP23 149 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CALM2P0DP24 149 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CALM3P0DP25 149 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 PHKA1P46020 1223 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 SEMA3FQ13275 785 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 NR5A1Q13285 461 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 TSR1Q2NL82 804 aaKnown RBP11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 MAGEB6Q8N7X4 407 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 ABCB6Q9NP58 842 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 ABHD10Q9NUJ1 306 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 MYO6Q9UM54 1294 aa11.44□□□□□ -0.58
TRAPPC6B-202ENST00000347691 BCL9LQ86UU0 1499 aa11.43□□□□□ -0.58
TRAPPC6B-202ENST00000347691 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
TRAPPC6B-202ENST00000347691 ZBTB22O15209 634 aa11.43□□□□□ -0.58
TRAPPC6B-202ENST00000347691 AFMP43652 599 aa11.43□□□□□ -0.58
TRAPPC6B-202ENST00000347691 TNNT3P45378 269 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC6B-202ENST00000347691 CASP8Q14790 479 aa11.43□□□□□ -0.58
TRAPPC6B-202ENST00000347691 RRP12Q5JTH9 1297 aaKnown RBP11.43□□□□□ -0.58
TRAPPC6B-202ENST00000347691 ESR2Q92731 530 aa11.43□□□□□ -0.58
TRAPPC6B-202ENST00000347691 NUP88Q99567 741 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms