RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 CLTAP09496 248 aa19.38■□□□□ 0.69
SPAST-202ENST00000345662 SUCLG2Q96I99 432 aa19.38■□□□□ 0.69
SPAST-202ENST00000345662 SPDYE3A6NKU9 549 aa19.38■□□□□ 0.69
SPAST-202ENST00000345662 METTL22Q9BUU2 404 aaPredicted RBP19.38■□□□□ 0.69
SPAST-202ENST00000345662 SPATS2LQ9NUQ6 558 aaKnown RBP19.38■□□□□ 0.69
SPAST-202ENST00000345662 STAP2Q9UGK3 403 aa19.38■□□□□ 0.69
SPAST-202ENST00000345662 RASEFQ8IZ41 740 aa19.38■□□□□ 0.69
SPAST-202ENST00000345662 PLCH2O75038 1416 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 C6orf229H3BNL8 230 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 STX2P32856 288 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 ZNF827Q17R98 1081 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 NFATC2IPQ8NCF5 419 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 HELBQ8NG08 1087 aaPredicted RBP19.37■□□□□ 0.69
SPAST-202ENST00000345662 RTEL1Q9NZ71 1219 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 SH3BGRP55822 239 aaPredicted RBP19.37■□□□□ 0.69
SPAST-202ENST00000345662 TRIM68Q6AZZ1 485 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 TTC19Q6DKK2 380 aaPredicted RBP19.37■□□□□ 0.69
SPAST-202ENST00000345662 GPIHBP1Q8IV16 184 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 PTPRTO14522 1441 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 IFT88Q13099 833 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 CCDC105Q8IYK2 499 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 NDUFB9Q9Y6M9 179 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 NOSTRINQ8IVI9 506 aa19.37■□□□□ 0.69
SPAST-202ENST00000345662 RNMTO43148 476 aaKnown RBP19.36■□□□□ 0.69
SPAST-202ENST00000345662 ZNF853P0CG23 659 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 DPCR1Q3MIW9 517 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 SLFNL1Q499Z3 407 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 FAM114A2Q9NRY5 505 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 CTTNBP2NLQ9P2B4 639 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 MAP3K19Q56UN5 1328 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 ODF2LQ9ULJ1 636 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 MGARPQ8TDB4 240 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 MRRFQ96E11 262 aaKnown RBP19.36■□□□□ 0.69
SPAST-202ENST00000345662 SETSIPP0DME0 302 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 MAGEA9P43362 315 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 E2F4Q16254 413 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 ANKRD20A3Q5VUR7 823 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 ICE2Q659A1 982 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 KCTD16Q68DU8 428 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 FBXO18Q8NFZ0 1043 aa19.36■□□□□ 0.69
SPAST-202ENST00000345662 TMEM87AQ8NBN3 555 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 XAGE2Q96GT9 111 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 USP44Q9H0E7 712 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 RBBP5Q15291 538 aaKnown RBP19.35■□□□□ 0.69
SPAST-202ENST00000345662 ANKRD42Q8N9B4 389 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 KIFAP3Q92845 792 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 NLRC4Q9NPP4 1024 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 H7C1D1 291 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 CALUO43852 315 aaPredicted RBP19.35■□□□□ 0.69
SPAST-202ENST00000345662 CCNT1O60563 726 aaKnown RBP19.35■□□□□ 0.69
SPAST-202ENST00000345662 PPP2R5EQ16537 467 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 DENND4BO75064 1496 aaPredicted RBP19.35■□□□□ 0.69
SPAST-202ENST00000345662 KRT15P19012 456 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 PHLDB3Q6NSJ2 640 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 CCDC97Q96F63 343 aaPredicted RBP19.35■□□□□ 0.69
SPAST-202ENST00000345662 CLIC4Q9Y696 253 aa19.35■□□□□ 0.69
SPAST-202ENST00000345662 KCNK3O14649 394 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 CASP14P31944 242 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 ADCK5Q3MIX3 580 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 CTTNBP2Q8WZ74 1663 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 CASQ2O14958 399 aaPredicted RBP19.34■□□□□ 0.69
SPAST-202ENST00000345662 PARP1P09874 1014 aaKnown RBP19.34■□□□□ 0.69
SPAST-202ENST00000345662 MCTP2Q6DN12 878 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 STAG1Q8WVM7 1258 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 LRRC59Q96AG4 307 aaKnown RBP19.34■□□□□ 0.69
SPAST-202ENST00000345662 ARMT1Q9H993 441 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 IRS4O14654 1257 aaPredicted RBP19.34■□□□□ 0.69
SPAST-202ENST00000345662 TXKP42681 527 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 EPHB4P54760 987 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 NBPF6Q5VWK0 638 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 NBPF4Q96M43 638 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 PCDHA5Q9Y5H7 936 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 KRIT1O00522 736 aa19.34■□□□□ 0.69
SPAST-202ENST00000345662 TPD52P55327 224 aaPredicted RBP19.34■□□□□ 0.69
SPAST-202ENST00000345662 FRMD3A2A2Y4 597 aa19.33■□□□□ 0.69
SPAST-202ENST00000345662 HSPA1LP34931 641 aa19.33■□□□□ 0.69
SPAST-202ENST00000345662 MAP4K1Q92918 833 aa19.33■□□□□ 0.69
SPAST-202ENST00000345662 AMFRQ9UKV5 643 aa19.33■□□□□ 0.69
SPAST-202ENST00000345662 SDCCAG8Q86SQ7 713 aaPredicted RBP19.33■□□□□ 0.69
SPAST-202ENST00000345662 JPH2Q9BR39 696 aaPredicted RBP19.33■□□□□ 0.69
SPAST-202ENST00000345662 FAM169AQ9Y6X4 670 aa19.33■□□□□ 0.69
SPAST-202ENST00000345662 CASP8Q14790 479 aa19.33■□□□□ 0.68
SPAST-202ENST00000345662 CEP120Q8N960 986 aa19.33■□□□□ 0.68
SPAST-202ENST00000345662 LRWD1Q9UFC0 647 aa19.33■□□□□ 0.68
SPAST-202ENST00000345662 SCRN1Q12765 414 aa19.33■□□□□ 0.68
SPAST-202ENST00000345662 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.33■□□□□ 0.68
SPAST-202ENST00000345662 LRRD1A4D1F6 860 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 TXNDC9O14530 226 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 RPSAP08865 295 aaKnown RBP19.32■□□□□ 0.68
SPAST-202ENST00000345662 GUCY2DQ02846 1103 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 GOLGA8FQ08AF8 430 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 GOLGA8DPQ0D2H9 430 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 MAP7Q14244 749 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 MMS22LQ6ZRQ5 1243 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 SEPT14Q6ZU15 432 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 EDC3Q96F86 508 aaKnown RBP19.32■□□□□ 0.68
SPAST-202ENST00000345662 FAM184BQ9ULE4 1060 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 ERCC3P19447 782 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 HOXC9P31274 260 aa19.32■□□□□ 0.68
SPAST-202ENST00000345662 ADAM21Q9UKJ8 722 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms