RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 SLC4A8Q2Y0W8 1093 aa14.82□□□□□ -0.04
CLK3-201ENST00000345005 SOGA3Q5TF21 947 aa14.82□□□□□ -0.04
CLK3-201ENST00000345005 C16orf86Q6ZW13 317 aa14.82□□□□□ -0.04
CLK3-201ENST00000345005 ANKS1AQ92625 1134 aa14.82□□□□□ -0.04
CLK3-201ENST00000345005 PHKBQ93100 1093 aa14.82□□□□□ -0.04
CLK3-201ENST00000345005 SPATA32Q96LK8 384 aa14.82□□□□□ -0.04
CLK3-201ENST00000345005 SLC26A6Q9BXS9 759 aa14.82□□□□□ -0.04
CLK3-201ENST00000345005 VPS33BQ9H267 617 aa14.82□□□□□ -0.04
CLK3-201ENST00000345005 USP40Q9NVE5 1235 aa14.82□□□□□ -0.04
CLK3-201ENST00000345005 TFIP11Q9UBB9 837 aaKnown RBP14.82□□□□□ -0.04
CLK3-201ENST00000345005 CCDC192P0DO97 292 aa14.81□□□□□ -0.04
CLK3-201ENST00000345005 CRKP46108 304 aa14.81□□□□□ -0.04
CLK3-201ENST00000345005 TRIM29Q14134 588 aa14.81□□□□□ -0.04
CLK3-201ENST00000345005 BRAPQ7Z569 592 aa14.81□□□□□ -0.04
CLK3-201ENST00000345005 TTC6Q86TZ1 520 aa14.81□□□□□ -0.04
CLK3-201ENST00000345005 DGKHQ86XP1 1220 aa14.81□□□□□ -0.04
CLK3-201ENST00000345005 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
CLK3-201ENST00000345005 ZDHHC15Q96MV8 337 aa14.81□□□□□ -0.04
CLK3-201ENST00000345005 MTFR1LQ9H019 292 aa14.81□□□□□ -0.04
CLK3-201ENST00000345005 ZBTB7AO95365 584 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 TSPY3P0CV98 308 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 TSPY8P0CW00 308 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 CDK8P49336 464 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 TROAPQ12815 778 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 LEO1Q8WVC0 666 aaPredicted RBP14.8□□□□□ -0.04
CLK3-201ENST00000345005 PIM2Q9P1W9 311 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 NMT2O60551 498 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 DEXIO95424 95 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 CAVIN2O95810 425 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 RASA1P20936 1047 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 OTUD7BQ6GQQ9 843 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 APOBEC3HQ6NTF7 200 aaKnown RBP14.8□□□□□ -0.04
CLK3-201ENST00000345005 CDC42EP5Q6NZY7 148 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 KIAA0825Q8IV33 1275 aa14.8□□□□□ -0.04
CLK3-201ENST00000345005 BRCA1P38398 1863 aaKnown RBP14.79□□□□□ -0.04
CLK3-201ENST00000345005 GOLGA6L4A6NEF3 574 aa14.79□□□□□ -0.04
CLK3-201ENST00000345005 WDHD1O75717 1129 aaPredicted RBP14.79□□□□□ -0.04
CLK3-201ENST00000345005 AKAP17AQ02040 695 aaKnown RBP14.79□□□□□ -0.04
CLK3-201ENST00000345005 KRT40Q6A162 431 aa14.79□□□□□ -0.04
CLK3-201ENST00000345005 RCSD1Q6JBY9 416 aa14.79□□□□□ -0.04
CLK3-201ENST00000345005 NBPF11Q86T75 865 aa14.79□□□□□ -0.04
CLK3-201ENST00000345005 CTCFLQ8NI51 663 aaPredicted RBP14.79□□□□□ -0.04
CLK3-201ENST00000345005 RNF26Q9BY78 433 aaPredicted RBP14.79□□□□□ -0.04
CLK3-201ENST00000345005 KAT14Q9H8E8 782 aa14.79□□□□□ -0.04
CLK3-201ENST00000345005 IL17RBQ9NRM6 502 aa14.79□□□□□ -0.04
CLK3-201ENST00000345005 SERPINA10Q9UK55 444 aa14.79□□□□□ -0.04
CLK3-201ENST00000345005 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
CLK3-201ENST00000345005 PICALMQ13492 652 aa14.78□□□□□ -0.04
CLK3-201ENST00000345005 MAP3K14Q99558 947 aa14.78□□□□□ -0.04
CLK3-201ENST00000345005 FUCA2Q9BTY2 467 aa14.78□□□□□ -0.04
CLK3-201ENST00000345005 RCOR1Q9UKL0 485 aa14.78□□□□□ -0.04
CLK3-201ENST00000345005 RBM5P52756 815 aaKnown RBP eCLIP14.78□□□□□ -0.04
CLK3-201ENST00000345005 KIF23Q02241 960 aaPredicted RBP14.78□□□□□ -0.04
CLK3-201ENST00000345005 SLC44A5Q8NCS7 719 aa14.78□□□□□ -0.04
CLK3-201ENST00000345005 NEDD1Q8NHV4 660 aa14.78□□□□□ -0.04
CLK3-201ENST00000345005 AIFM3Q96NN9 605 aa14.78□□□□□ -0.04
CLK3-201ENST00000345005 FER1L6Q2WGJ9 1857 aa14.77□□□□□ -0.04
CLK3-201ENST00000345005 MYO3BQ8WXR4 1341 aa14.77□□□□□ -0.05
CLK3-201ENST00000345005 YDJCA8MPS7 323 aa14.77□□□□□ -0.05
CLK3-201ENST00000345005 PRPF3O43395 683 aaKnown RBP14.77□□□□□ -0.05
CLK3-201ENST00000345005 KIF5BP33176 963 aa14.77□□□□□ -0.05
CLK3-201ENST00000345005 LARGE2Q8N3Y3 721 aa14.77□□□□□ -0.05
CLK3-201ENST00000345005 CCDC82Q8N4S0 544 aa14.77□□□□□ -0.05
CLK3-201ENST00000345005 DDX4Q9NQI0 724 aaKnown RBP14.77□□□□□ -0.05
CLK3-201ENST00000345005 GJB4Q9NTQ9 266 aa14.77□□□□□ -0.05
CLK3-201ENST00000345005 SWAP70Q9UH65 585 aa14.77□□□□□ -0.05
CLK3-201ENST00000345005 BAZ2BQ9UIF8 2168 aaKnown RBP14.76□□□□□ -0.05
CLK3-201ENST00000345005 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
CLK3-201ENST00000345005 XBP1P17861 261 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 GNL2Q13823 731 aaKnown RBP14.76□□□□□ -0.05
CLK3-201ENST00000345005 SAFBQ15424 915 aaKnown RBP eCLIP14.76□□□□□ -0.05
CLK3-201ENST00000345005 TMTC3Q6ZXV5 915 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 PNMA1Q8ND90 353 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 GTPBP4Q9BZE4 634 aaKnown RBP14.76□□□□□ -0.05
CLK3-201ENST00000345005 OSBPL5Q9H0X9 879 aaPredicted RBP14.76□□□□□ -0.05
CLK3-201ENST00000345005 SPON1Q9HCB6 807 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 KIF20AO95235 890 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 HLA-DOAP06340 250 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 GABPAQ06546 454 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 FUT2Q10981 343 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 SYCP1Q15431 976 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 DALRD3Q5D0E6 543 aaKnown RBP14.76□□□□□ -0.05
CLK3-201ENST00000345005 CMTR1Q8N1G2 835 aaKnown RBP14.76□□□□□ -0.05
CLK3-201ENST00000345005 KIAA1524Q8TCG1 905 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 USP28Q96RU2 1077 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 RTEL1Q9NZ71 1219 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 TAOK2Q9UL54 1235 aa14.76□□□□□ -0.05
CLK3-201ENST00000345005 U2AF2P26368 475 aaKnown RBP eCLIP14.75□□□□□ -0.053e-6■■□□□ 13
CLK3-201ENST00000345005 GUCY1A2P33402 732 aa14.75□□□□□ -0.05
CLK3-201ENST00000345005 GNAQP50148 359 aa14.75□□□□□ -0.05
CLK3-201ENST00000345005 MYSM1Q5VVJ2 828 aa14.75□□□□□ -0.05
CLK3-201ENST00000345005 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.75□□□□□ -0.05
CLK3-201ENST00000345005 FAM200AQ8TCP9 573 aa14.75□□□□□ -0.05
CLK3-201ENST00000345005 IDI2Q9BXS1 227 aa14.75□□□□□ -0.05
CLK3-201ENST00000345005 DHX36Q9H2U1 1008 aaKnown RBP14.75□□□□□ -0.05
CLK3-201ENST00000345005 ZNF277Q9NRM2 450 aaPredicted RBP14.75□□□□□ -0.05
CLK3-201ENST00000345005 SERPINB13Q9UIV8 391 aa14.75□□□□□ -0.05
CLK3-201ENST00000345005 KIF28PB7ZC32 967 aa14.74□□□□□ -0.05
CLK3-201ENST00000345005 PLEKHA8P1O95397 391 aa14.74□□□□□ -0.05
CLK3-201ENST00000345005 MMP1P03956 469 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms