RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 C19orf81C9J6K1 198 aa17.38■□□□□ 0.37
HMGN3-202ENST00000344726 ELNP15502 786 aa17.38■□□□□ 0.37
HMGN3-202ENST00000344726 PABPC4Q13310 644 aaKnown RBP eCLIP17.38■□□□□ 0.37
HMGN3-202ENST00000344726 ZYXQ15942 572 aaKnown RBP17.38■□□□□ 0.37
HMGN3-202ENST00000344726 ABCB5Q2M3G0 1257 aa17.38■□□□□ 0.37
HMGN3-202ENST00000344726 ANKRD45Q5TZF3 282 aa17.38■□□□□ 0.37
HMGN3-202ENST00000344726 OSBP2Q969R2 916 aa17.38■□□□□ 0.37
HMGN3-202ENST00000344726 DYNLL2Q96FJ2 89 aa17.38■□□□□ 0.37
HMGN3-202ENST00000344726 P2RX7Q99572 595 aaKnown RBP17.38■□□□□ 0.37
HMGN3-202ENST00000344726 TMEM106CQ9BVX2 250 aa17.38■□□□□ 0.37
HMGN3-202ENST00000344726 ATP8A2Q9NTI2 1148 aa17.38■□□□□ 0.37
HMGN3-202ENST00000344726 TMOD4Q9NZQ9 345 aa17.38■□□□□ 0.37
HMGN3-202ENST00000344726 MX1P20591 662 aa17.37■□□□□ 0.37
HMGN3-202ENST00000344726 GCLCP48506 637 aaPredicted RBP17.37■□□□□ 0.37
HMGN3-202ENST00000344726 RAB3GAP1Q15042 981 aa17.37■□□□□ 0.37
HMGN3-202ENST00000344726 GCC1Q96CN9 775 aa17.37■□□□□ 0.37
HMGN3-202ENST00000344726 STRBPQ96SI9 672 aaKnown RBP17.37■□□□□ 0.37
HMGN3-202ENST00000344726 MORF4L1Q9UBU8 362 aa17.37■□□□□ 0.37
HMGN3-202ENST00000344726 SLC4A4Q9Y6R1 1079 aa17.37■□□□□ 0.37
HMGN3-202ENST00000344726 USP17L12C9JPN9 530 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 USP17L21D6R901 530 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 ERC2O15083 957 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 RNF113AO15541 343 aaKnown RBP17.36■□□□□ 0.37
HMGN3-202ENST00000344726 ADCY3O60266 1144 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 GLRX3O76003 335 aaKnown RBP17.36■□□□□ 0.37
HMGN3-202ENST00000344726 HERVK_113P62684 666 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 IRX3P78415 501 aaPredicted RBP17.36■□□□□ 0.37
HMGN3-202ENST00000344726 SEPT2Q15019 361 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 C12orf60Q5U649 245 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 PRPF38BQ5VTL8 546 aaKnown RBP17.36■□□□□ 0.37
HMGN3-202ENST00000344726 USP17L2Q6R6M4 530 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 APPBP2Q92624 585 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 C12orf42Q96LP6 360 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 RBPJLQ9UBG7 517 aa17.36■□□□□ 0.37
HMGN3-202ENST00000344726 SUPT16HQ9Y5B9 1047 aaKnown RBP17.36■□□□□ 0.37
HMGN3-202ENST00000344726 A0A1W2PRG0 241 aa17.35■□□□□ 0.37
HMGN3-202ENST00000344726 M0R2C6 588 aa17.35■□□□□ 0.37
HMGN3-202ENST00000344726 CCL5P13501 91 aa17.35■□□□□ 0.37
HMGN3-202ENST00000344726 IRF5Q13568 498 aa17.35■□□□□ 0.37
HMGN3-202ENST00000344726 AAMPQ13685 434 aa17.35■□□□□ 0.37
HMGN3-202ENST00000344726 CTR9Q6PD62 1173 aa17.35■□□□□ 0.37
HMGN3-202ENST00000344726 SLAIN1Q8ND83 568 aa17.35■□□□□ 0.37
HMGN3-202ENST00000344726 UNC93B1Q9H1C4 597 aa17.35■□□□□ 0.37
HMGN3-202ENST00000344726 GJD2Q9UKL4 321 aa17.35■□□□□ 0.37
HMGN3-202ENST00000344726 GSG1L2A8MUP6 293 aa17.34■□□□□ 0.37
HMGN3-202ENST00000344726 CNMDO75829 334 aa17.34■□□□□ 0.37
HMGN3-202ENST00000344726 IGHDP01880 384 aa17.34■□□□□ 0.37
HMGN3-202ENST00000344726 VCAM1P19320 739 aa17.34■□□□□ 0.37
HMGN3-202ENST00000344726 Q3C1V9 767 aa17.34■□□□□ 0.37
HMGN3-202ENST00000344726 CLEC10AQ8IUN9 316 aa17.34■□□□□ 0.37
HMGN3-202ENST00000344726 SMC5Q8IY18 1101 aa17.34■□□□□ 0.37
HMGN3-202ENST00000344726 SEC62Q99442 399 aaKnown RBP17.34■□□□□ 0.37
HMGN3-202ENST00000344726 FEZ1Q99689 392 aa17.34■□□□□ 0.37
HMGN3-202ENST00000344726 GREB1LQ9C091 1923 aaPredicted RBP17.34■□□□□ 0.37
HMGN3-202ENST00000344726 KIAA1683Q9H0B3 1180 aa17.34■□□□□ 0.37
HMGN3-202ENST00000344726 CABP5Q9NP86 173 aa17.34■□□□□ 0.37
HMGN3-202ENST00000344726 RLFQ13129 1914 aa17.33■□□□□ 0.37
HMGN3-202ENST00000344726 GPAA1O43292 621 aa17.33■□□□□ 0.36
HMGN3-202ENST00000344726 INHAP05111 366 aa17.33■□□□□ 0.36
HMGN3-202ENST00000344726 ZFYP08048 801 aaPredicted RBP17.33■□□□□ 0.36
HMGN3-202ENST00000344726 AKR1B1P15121 316 aa17.33■□□□□ 0.36
HMGN3-202ENST00000344726 KIAA1755Q5JYT7 1200 aa17.33■□□□□ 0.36
HMGN3-202ENST00000344726 PXYLP1Q8TE99 480 aa17.33■□□□□ 0.36
HMGN3-202ENST00000344726 COA7Q96BR5 231 aa17.33■□□□□ 0.36
HMGN3-202ENST00000344726 EPB41L4AQ9HCS5 686 aaPredicted RBP17.33■□□□□ 0.36
HMGN3-202ENST00000344726 STAP2Q9UGK3 403 aa17.33■□□□□ 0.36
HMGN3-202ENST00000344726 SWAP70Q9UH65 585 aa17.33■□□□□ 0.36
HMGN3-202ENST00000344726 MPHOSPH10O00566 681 aaKnown RBP17.32■□□□□ 0.36
HMGN3-202ENST00000344726 CDK8P49336 464 aa17.32■□□□□ 0.36
HMGN3-202ENST00000344726 PDE1AP54750 535 aa17.32■□□□□ 0.36
HMGN3-202ENST00000344726 C16orf86Q6ZW13 317 aa17.32■□□□□ 0.36
HMGN3-202ENST00000344726 SIAH1Q8IUQ4 282 aa17.32■□□□□ 0.36
HMGN3-202ENST00000344726 FSD1Q9BTV5 496 aa17.32■□□□□ 0.36
HMGN3-202ENST00000344726 LNPKQ9C0E8 428 aa17.32■□□□□ 0.36
HMGN3-202ENST00000344726 RNF208Q9H0X6 261 aa17.32■□□□□ 0.36
HMGN3-202ENST00000344726 PORCNQ9H237 461 aa17.32■□□□□ 0.36
HMGN3-202ENST00000344726 BIN2Q9UBW5 565 aaPredicted RBP17.32■□□□□ 0.36
HMGN3-202ENST00000344726 TAOK2Q9UL54 1235 aa17.32■□□□□ 0.36
HMGN3-202ENST00000344726 PARP14Q460N5 1801 aa17.32■□□□□ 0.36
HMGN3-202ENST00000344726 A0A0G2JMZ2 1700 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 GJB1P08034 283 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 GJA8P48165 433 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 ERVK-9P63128 1117 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 ERVK-24P63145 666 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 UBXN2AP68543 259 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 TRIM32Q13049 653 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 CATSPERGQ6ZRH7 1159 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 GPRC5AQ8NFJ5 357 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 PAGR1Q9BTK6 254 aa17.31■□□□□ 0.36
HMGN3-202ENST00000344726 RWDD1Q9H446 243 aaPredicted RBP17.31■□□□□ 0.36
HMGN3-202ENST00000344726 ZBTB47Q9UFB7 747 aaPredicted RBP17.31■□□□□ 0.36
HMGN3-202ENST00000344726 USP17L15C9J2P7 530 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 USP17L13C9JLJ4 530 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 USP17L11C9JVI0 530 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 USP17L18D6R9N7 530 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 USP17L22D6RA61 530 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 USP17L17D6RBQ6 530 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 USP17L19D6RCP7 530 aa17.3■□□□□ 0.36
HMGN3-202ENST00000344726 USP17L20D6RJB6 530 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms