RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 APOBEC3FQ8IUX4 373 aaKnown RBP18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 ZNF654Q8IZM8 581 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 IFT74Q96LB3 600 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 SPAG5Q96R06 1193 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 KANSL2Q9H9L4 492 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.48■□□□□ 0.551e-8■■■□□ 18.5
SMARCA4-201ENST00000344626 CDHR2Q9BYE9 1310 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 CD163L1Q9NR16 1453 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 ADCY9O60503 1353 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 VWA3AA6NCI4 1184 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 GOLGA6L10A6NI86 522 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 RPL13P26373 211 aaKnown RBP18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 DIS3L2Q8IYB7 885 aaKnown RBP18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 TRIM6Q9C030 488 aaPredicted RBP18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 SPATA31D1Q6ZQQ2 1576 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 PDE4DQ08499 809 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 STAP2Q9UGK3 403 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 PNMA3Q9UL41 463 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 PREX1Q8TCU6 1659 aa18.48■□□□□ 0.55
SMARCA4-201ENST00000344626 ERLIN1O75477 346 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 FGAP02671 866 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 ASNSP08243 561 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 UVSSAQ2YD98 709 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 A0A0D9SFI3 127 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 KLRF2D3W0D1 207 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 FBXO11Q86XK2 927 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 ZHX1Q9UKY1 873 aaPredicted RBP18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 REXO1Q8N1G1 1221 aaKnown RBP18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 PHKBQ93100 1093 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 ZNF521Q96K83 1311 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 CPDO75976 1380 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 ATP6V0A2Q9Y487 856 aa18.47■□□□□ 0.55
SMARCA4-201ENST00000344626 LMNB1P20700 586 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 TTC38Q5R3I4 469 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 MAEAQ7L5Y9 396 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 FOXP4Q8IVH2 680 aaPredicted RBP18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 ZNF341Q9BYN7 854 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 DACT1Q9NYF0 836 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 CNTNAP4Q9C0A0 1308 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 DDAH1O94760 285 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 TXKP42681 527 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 RNF169Q8NCN4 708 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 TNKSO95271 1327 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 NRXN1Q9ULB1 1477 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 FAM196BA6NMK8 535 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 CCDC169A6NNP5 214 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 SYT1P21579 422 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 SYNCQ9H7C4 482 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 MED23Q9ULK4 1368 aa18.46■□□□□ 0.55
SMARCA4-201ENST00000344626 PRKAB2O43741 272 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 GYS1P13807 737 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 ALS2CR12Q96Q35 445 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 KCNG1Q9UIX4 513 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 ARHGEF35A5YM69 484 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 DNM2P50570 870 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 SEPT7Q16181 437 aaKnown RBP18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 TBC1D16Q8TBP0 767 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 ZNF157P51786 506 aaPredicted RBP18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 DPH6Q7L8W6 267 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 IFI16Q16666 785 aaKnown RBP18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 ZMYM1Q5SVZ6 1142 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 TMC6Q7Z403 805 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 ZNF274Q96GC6 653 aaPredicted RBP18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 EXOC7Q9UPT5 735 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 ELP1O95163 1332 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 GH2P01242 217 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 HUNKP57058 714 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 NCAPH2Q6IBW4 605 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 CDAN1Q8IWY9 1227 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 FERMT1Q9BQL6 677 aa18.45■□□□□ 0.54
SMARCA4-201ENST00000344626 NEFHP12036 1026 aa18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 EEPD1Q7L9B9 569 aa18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 CMTR1Q8N1G2 835 aaKnown RBP18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 AP5M1Q9H0R1 490 aa18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 TRPC6Q9Y210 931 aa18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 ANO1Q5XXA6 986 aa18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 DYNLL2Q96FJ2 89 aa18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 GCOM1H8Y6P7 765 aaPredicted RBP18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 POLR2MP0CAP2 368 aa18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 POTEB2H3BUK9 544 aa18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 RFX1P22670 979 aa18.44■□□□□ 0.54
SMARCA4-201ENST00000344626 SMCO2A6NFE2 343 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 SPP2Q13103 211 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 GIMAP6Q6P9H5 292 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 METTL13Q8N6R0 699 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 PCDHA1Q9Y5I3 950 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 GMPSP49915 693 aaPredicted RBP18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 LCORLQ8N3X6 602 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 CTNNA2P26232 953 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 STRN3Q13033 797 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 TRIM28Q13263 835 aaKnown RBP18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 GALNT17Q6IS24 598 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 KCTD1Q719H9 257 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 ADD2P35612 726 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 NT5C2P49902 561 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 CALCRLQ16602 461 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 PRAMEF18Q5VWM3 479 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 LRWD1Q9UFC0 647 aa18.43■□□□□ 0.54
SMARCA4-201ENST00000344626 GPATCH4Q5T3I0 446 aaKnown RBP18.42■□□□□ 0.54
SMARCA4-201ENST00000344626 PSTPIP2Q9H939 334 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms