RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ANKRD20A8PQ5CZ79 823 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 DUSP27Q5VZP5 1158 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 UBL4BQ8N7F7 174 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 LRGUKQ96M69 825 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 SLC38A10Q9HBR0 1119 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 TCEAL9Q9UHQ7 104 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ADCY5O95622 1261 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 KRT83P78385 493 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 SYT10Q6XYQ8 523 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 TTC39CQ8N584 583 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 CCDC138Q96M89 665 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ESYT2A0FGR8 921 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 BTBD19C9JJ37 291 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 IFT20Q8IY31 132 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 TATDN2Q93075 761 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 CAAP1Q9H8G2 361 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ERCC5P28715 1186 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-202ENST00000344113 RTFDC1Q9BY42 306 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-202ENST00000344113 PLCB3Q01970 1234 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 LAMB3Q13751 1172 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 CHMP6Q96FZ7 201 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 SYCE1LA8MT33 242 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ELL2O00472 640 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-202ENST00000344113 TNNI2P48788 182 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 MAP3K12Q12852 859 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 CCDC124Q96CT7 223 aaKnown RBP4.16□□□□□ -1.74
SYNE2-202ENST00000344113 NKIRAS1Q9NYS0 192 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 TMEM191CA6NGB0 347 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 TMEM191BP0C7N4 346 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 CHCHD4Q8N4Q1 142 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 SCYL1Q96KG9 808 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 PLEKHG4BQ96PX9 1271 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 LIFRP42702 1097 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 NNTQ13423 1086 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 SGSM1Q2NKQ1 1148 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 MPRIPQ6WCQ1 1025 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 UBXN6Q9BZV1 441 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 UBE4BO95155 1302 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 SCRN3Q0VDG4 424 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 EMBQ6PCB8 327 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ENOX1Q8TC92 643 aaKnown RBP4.16□□□□□ -1.74
SYNE2-202ENST00000344113 WASF1Q92558 559 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 CABP1Q9NZU7 370 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ATP2A1O14983 1001 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 PLS1Q14651 629 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ATP2B3Q16720 1220 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 EMC10Q5UCC4 262 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ANKRD13DQ6ZTN6 518 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ST13P5Q8NFI4 369 aaPredicted RBP4.16□□□□□ -1.74
SYNE2-202ENST00000344113 HOMER2Q9NSB8 354 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 PARP2Q9UGN5 583 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ATP11BQ9Y2G3 1177 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 GOLGA8CPA6NN73 597 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 F8VZ95 297 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 SYF2O95926 243 aaKnown RBP4.16□□□□□ -1.74
SYNE2-202ENST00000344113 GPTP24298 496 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 ST13P50502 369 aaKnown RBP4.16□□□□□ -1.74
SYNE2-202ENST00000344113 TDRD12Q587J7 1177 aaKnown RBP4.16□□□□□ -1.74
SYNE2-202ENST00000344113 CADPS2Q86UW7 1296 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 TUBB1Q9H4B7 451 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 NDE1Q9NXR1 346 aa4.16□□□□□ -1.74
SYNE2-202ENST00000344113 STIP1P31948 543 aaKnown RBP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 AMPHP49418 695 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 TRIML2Q8N7C3 387 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 ACMSDQ8TDX5 336 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 PHKBQ93100 1093 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 MPHOSPH9Q99550 1183 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 ANGPTL3Q9Y5C1 460 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 PALM3A6NDB9 673 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 ADSLP30566 484 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 CYLC2Q14093 348 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 TMEM259Q4ZIN3 620 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 SMYD1Q8NB12 490 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 ARHGAP45Q92619 1136 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 TRIM39Q9HCM9 518 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 MRPL40Q9NQ50 206 aaKnown RBP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 TXLNGQ9NUQ3 528 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 TBC1D23Q9NUY8 699 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 SLC52A1Q9NWF4 448 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 STK17AQ9UEE5 414 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 FOSP01100 380 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 WDR93Q6P2C0 686 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 CASP10Q92851 521 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 CASP2P42575 452 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 KIF23Q02241 960 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 AKNAD1Q5T1N1 836 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 ANKRD2Q9GZV1 360 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 RAB14P61106 215 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 FKBP15Q5T1M5 1219 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 C6orf118Q5T5N4 469 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 MAATS1Q7Z4T9 603 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 ARHGAP6O43182 974 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 AFAP1L2Q8N4X5 818 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 TRIML1Q8N9V2 468 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 RUNDC3BQ96NL0 473 aa4.15□□□□□ -1.74
SYNE2-202ENST00000344113 DMAP1Q9NPF5 467 aaPredicted RBP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 U2AF2P26368 475 aaKnown RBP eCLIP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 RNASE9P60153 205 aaKnown RBP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 MRPL28Q13084 256 aaKnown RBP4.15□□□□□ -1.74
SYNE2-202ENST00000344113 CEP85Q6P2H3 762 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms