RNA–Protein interactions for RNA: ENST00000343968.8

MS4A4A-202, Transcript of membrane spanning 4-domains A4A, humanhuman

TSL 2

Gene MS4A4A, Length 1,676 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4A-202ENST00000343968 TRIM34Q9BYJ4 488 aa16.11■□□□□ 0.17
MS4A4A-202ENST00000343968 MTMR4Q9NYA4 1195 aa16.11■□□□□ 0.17
MS4A4A-202ENST00000343968 PPP2R3BQ9Y5P8 575 aa16.11■□□□□ 0.17
MS4A4A-202ENST00000343968 CCDC196A0A1B0GTZ2 297 aa16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 GOLGA8AA7E2F4 631 aa16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 PTMSP20962 102 aa16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 NTRK3Q16288 839 aa16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 MICU3Q86XE3 530 aa16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 FANCBQ8NB91 859 aa16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 RGS22Q8NE09 1264 aa16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 CEP95Q96GE4 821 aa16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 NCOA5Q9HCD5 579 aaKnown RBP16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 ISY1Q9ULR0 285 aaKnown RBP16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 SCN4AP35499 1836 aa16.1■□□□□ 0.17
MS4A4A-202ENST00000343968 ASTN2O75129 1339 aaPredicted RBP16.09■□□□□ 0.17
MS4A4A-202ENST00000343968 CDC27P30260 824 aa16.09■□□□□ 0.17
MS4A4A-202ENST00000343968 RAB3GAP1Q15042 981 aa16.09■□□□□ 0.17
MS4A4A-202ENST00000343968 TMEM47Q9BQJ4 181 aa16.09■□□□□ 0.17
MS4A4A-202ENST00000343968 DEFB129Q9H1M3 183 aa16.09■□□□□ 0.17
MS4A4A-202ENST00000343968 KAT14Q9H8E8 782 aa16.09■□□□□ 0.17
MS4A4A-202ENST00000343968 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.09■□□□□ 0.17
MS4A4A-202ENST00000343968 RBM28Q9NW13 759 aaKnown RBP16.09■□□□□ 0.17
MS4A4A-202ENST00000343968 WDR90Q96KV7 1748 aa16.09■□□□□ 0.17
MS4A4A-202ENST00000343968 CDKL5O76039 1030 aa16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 SLURP2P0DP57 97 aa16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 TOP1P11387 765 aaKnown RBP16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 IFNAR1P17181 557 aa16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 ADD1P35611 737 aaKnown RBP16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 RTN1Q16799 776 aa16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 ANGEL2Q5VTE6 544 aaKnown RBP16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 CPLX2Q6PUV4 134 aaKnown RBP16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 TMEM179Q6ZVK1 233 aa16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 USP50Q70EL3 339 aaPredicted RBP16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 PNMA1Q8ND90 353 aa16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 UTRNP46939 3433 aa16.08■□□□□ 0.17
MS4A4A-202ENST00000343968 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 JAK2O60674 1132 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 BRD1O95696 1058 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 TTLL1O95922 423 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 PDCP20941 246 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 MKL1Q969V6 931 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 HOOK2Q96ED9 719 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 MYL10Q9BUA6 226 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 NYAP2Q9P242 653 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 KIF3AQ9Y496 699 aa16.08■□□□□ 0.16
MS4A4A-202ENST00000343968 STK36Q9NRP7 1315 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 FAM196BA6NMK8 535 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 CPLX1O14810 134 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 GUCY1A2P33402 732 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 ABCB5Q2M3G0 1257 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 CDAN1Q8IWY9 1227 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 ZC3H15Q8WU90 426 aaKnown RBP16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 GINM1Q9NU53 330 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 GGA3Q9NZ52 723 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 SYNPO2Q9UMS6 1093 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 STX8Q9UNK0 236 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 SRCAPQ6ZRS2 3230 aa16.07■□□□□ 0.16
MS4A4A-202ENST00000343968 FDPSP14324 419 aaKnown RBP16.06■□□□□ 0.16
MS4A4A-202ENST00000343968 RXRAP19793 462 aa16.06■□□□□ 0.16
MS4A4A-202ENST00000343968 SYT1P21579 422 aa16.06■□□□□ 0.16
MS4A4A-202ENST00000343968 RRP1BQ14684 758 aaKnown RBP16.06■□□□□ 0.16
MS4A4A-202ENST00000343968 RAB11FIP4Q86YS3 637 aa16.06■□□□□ 0.16
MS4A4A-202ENST00000343968 ZDHHC9Q9Y397 364 aa16.06■□□□□ 0.16
MS4A4A-202ENST00000343968 IQCA1LA6NCM1 817 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 KIF5BP33176 963 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 GRM4Q14833 912 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 CTCFLQ8NI51 663 aaPredicted RBP16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 DDX11L8A8MPP1 907 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 PHF20L1A8MW92 1017 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 MPHOSPH10O00566 681 aaKnown RBP16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 STX6O43752 255 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 SNHG28P0DPA3 235 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 EPHX2P34913 555 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 GNAQP50148 359 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 FUT2Q10981 343 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 PKP1Q13835 747 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 LARP1BQ659C4 914 aaKnown RBP16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 CLEC17AQ6ZS10 378 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 TMTC3Q6ZXV5 915 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 NBPF11Q86T75 865 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 CCDC144CPQ8IYA2 1237 aa16.05■□□□□ 0.16
MS4A4A-202ENST00000343968 WDR33Q9C0J8 1336 aaKnown RBP16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 PALM3A6NDB9 673 aaPredicted RBP16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 POTECB2RU33 542 aa16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 FMNL1O95466 1100 aaPredicted RBP16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 SMARCA1P28370 1054 aa16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 CAP2P40123 477 aa16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 DCAF15Q66K64 600 aa16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 SIAH1Q8IUQ4 282 aa16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 FAM184AQ8NB25 1140 aa16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 CLIP2Q9UDT6 1046 aa16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 ZNF112Q9UJU3 913 aa16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 MYH4Q9Y623 1939 aa16.04■□□□□ 0.16
MS4A4A-202ENST00000343968 GDF11O95390 407 aa16.03■□□□□ 0.16
MS4A4A-202ENST00000343968 GH2P01242 217 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms