RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TMTC1Q8IUR5 882 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 NUP133Q8WUM0 1156 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 CAPS2Q9BXY5 557 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 ZBTB3Q9H5J0 574 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 CEP126Q9P2H0 1117 aa16.78■□□□□ 0.28
CLCN1-201ENST00000343257 SH2B2O14492 632 aaPredicted RBP16.77■□□□□ 0.28
CLCN1-201ENST00000343257 PTPREP23469 700 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 MAP9Q49MG5 647 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 CYP26C1Q6V0L0 522 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 SUGP1Q8IWZ8 645 aaKnown RBP16.77■□□□□ 0.28
CLCN1-201ENST00000343257 JADE2Q9NQC1 790 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 REXO2Q9Y3B8 237 aaKnown RBP16.77■□□□□ 0.28
CLCN1-201ENST00000343257 SAR1BQ9Y6B6 198 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 RGPD8O14715 1765 aaPredicted RBP16.77■□□□□ 0.28
CLCN1-201ENST00000343257 MACROD2A1Z1Q3 448 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 ATP2B2Q01814 1243 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 CTDSPL2Q05D32 466 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 RRAGBQ5VZM2 374 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 DHX37Q8IY37 1157 aaKnown RBP16.77■□□□□ 0.28
CLCN1-201ENST00000343257 HDAC7Q8WUI4 952 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 AIDAQ96BJ3 306 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 XAGE2Q96GT9 111 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 CENPHQ9H3R5 247 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 SMARCAL1Q9NZC9 954 aa16.77■□□□□ 0.28
CLCN1-201ENST00000343257 EPN1Q9Y6I3 576 aaPredicted RBP16.77■□□□□ 0.28
CLCN1-201ENST00000343257 IFIT3O14879 490 aaKnown RBP16.77■□□□□ 0.27
CLCN1-201ENST00000343257 IDH1O75874 414 aaKnown RBP16.77■□□□□ 0.27
CLCN1-201ENST00000343257 PDCLQ13371 301 aa16.77■□□□□ 0.27
CLCN1-201ENST00000343257 FAM107BQ9H098 131 aa16.77■□□□□ 0.27
CLCN1-201ENST00000343257 FAM217BQ9NTX9 383 aaPredicted RBP16.77■□□□□ 0.27
CLCN1-201ENST00000343257 DUSP10Q9Y6W6 482 aa16.77■□□□□ 0.27
CLCN1-201ENST00000343257 SHTN1A0MZ66 631 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 EYA2O00167 538 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 PDE2AO00408 941 aaPredicted RBP16.76■□□□□ 0.27
CLCN1-201ENST00000343257 IL15P40933 162 aaPredicted RBP16.76■□□□□ 0.27
CLCN1-201ENST00000343257 TDO2P48775 406 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 UBXN1Q04323 297 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 KIAA1328Q86T90 577 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 SH2D3CQ8N5H7 860 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 SLC12A7Q9Y666 1083 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 ZC3H4Q9UPT8 1303 aaKnown RBP16.76■□□□□ 0.27
CLCN1-201ENST00000343257 CPP00450 1065 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 ERCC5P28715 1186 aaPredicted RBP16.76■□□□□ 0.27
CLCN1-201ENST00000343257 PBX1P40424 430 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 AARSP49588 968 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLCN1-201ENST00000343257 NTRK3Q16288 839 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 TTC5Q8N0Z6 440 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 JAKMIP2Q96AA8 810 aa16.76■□□□□ 0.27
CLCN1-201ENST00000343257 TUBB2AQ13885 445 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 TRAPPC11Q7Z392 1133 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 TUBB2BQ9BVA1 445 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 VPS54Q9P1Q0 977 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 NDUFA10O95299 355 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 TTLL7Q6ZT98 887 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 ANKRD18AQ8IVF6 992 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 APPBP2Q92624 585 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 PAGE5Q96GU1 130 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 CD248Q9HCU0 757 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 EID1Q9Y6B2 187 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 TNRQ92752 1358 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 KCNA6P17658 529 aa16.75■□□□□ 0.27
CLCN1-201ENST00000343257 SMCR8Q8TEV9 937 aaPredicted RBP16.75■□□□□ 0.27
CLCN1-201ENST00000343257 HEG1Q9ULI3 1381 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 NDUFAB1O14561 156 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 ECM2O94769 699 aaPredicted RBP16.74■□□□□ 0.27
CLCN1-201ENST00000343257 PSEN1P49768 467 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 CYP27A1Q02318 531 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 CUL4BQ13620 913 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 ESCO1Q5FWF5 840 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 RNF187Q5TA31 235 aaPredicted RBP16.74■□□□□ 0.27
CLCN1-201ENST00000343257 NT5DC1Q5TFE4 455 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 BANK1Q8NDB2 785 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 ARL8AQ96BM9 186 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 PHF8Q9UPP1 1060 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 AXIN2Q9Y2T1 843 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 PPP1R3GB7ZBB8 358 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 FBXL16Q8N461 479 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 MSL3Q8N5Y2 521 aaKnown RBP16.74■□□□□ 0.27
CLCN1-201ENST00000343257 SYMPKQ92797 1274 aaKnown RBP16.74■□□□□ 0.27
CLCN1-201ENST00000343257 EHD2Q9NZN4 543 aa16.74■□□□□ 0.27
CLCN1-201ENST00000343257 CPDO75976 1380 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 COPB1P53618 953 aaKnown RBP16.73■□□□□ 0.27
CLCN1-201ENST00000343257 CASP7P55210 303 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 CCNI2Q6ZMN8 369 aaPredicted RBP16.73■□□□□ 0.27
CLCN1-201ENST00000343257 CTAGE1Q96RT6 745 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 VIPAS39Q9H9C1 493 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 MRC1P22897 1456 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 TOPAZ1Q8N9V7 1692 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 TTC26A0AVF1 554 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 MMP1P03956 469 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 ZNF174Q15697 407 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 CDKAL1Q5VV42 579 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 KDM3BQ7LBC6 1761 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 PRDM1O75626 825 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 CXCR5P32302 372 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 DNA2P51530 1060 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 TRIML1Q8N9V2 468 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 CEP89Q96ST8 783 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 LACRTQ9GZZ8 138 aa16.73■□□□□ 0.27
CLCN1-201ENST00000343257 DIP2BQ9P265 1576 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms