RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 LZTFL1Q9NQ48 299 aa11.27□□□□□ -0.6
UBE2D3-203ENST00000343106 GNL3LQ9NVN8 582 aaKnown RBP11.27□□□□□ -0.6
UBE2D3-203ENST00000343106 TFCP2L1Q9NZI6 479 aa11.27□□□□□ -0.6
UBE2D3-203ENST00000343106 PARP3Q9Y6F1 533 aa11.27□□□□□ -0.6
UBE2D3-203ENST00000343106 TOGARAM1Q9Y4F4 1720 aa11.27□□□□□ -0.6
UBE2D3-203ENST00000343106 PAPPAQ13219 1627 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 ADAMTS3O15072 1205 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 SEC31AO94979 1220 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 CDC25AP30304 524 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 PLCD1P51178 756 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 NR1I3Q14994 352 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 CAVIN4Q5BKX8 364 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 KANK3Q6NY19 840 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 PIK3AP1Q6ZUJ8 805 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 IQCA1Q86XH1 822 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 CDC5LQ99459 802 aaKnown RBP11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 PHF20Q9BVI0 1012 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 AATFQ9NY61 560 aaKnown RBP eCLIP11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 PHLPP2Q6ZVD8 1323 aa11.27□□□□□ -0.61
UBE2D3-203ENST00000343106 AKAP11Q9UKA4 1901 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 MYH15Q9Y2K3 1946 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 CYP2D6P10635 497 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 MCM7P33993 719 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 RBL2Q08999 1139 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 PTGDRQ13258 359 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 CTR9Q6PD62 1173 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 ZNF384Q8TF68 577 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 MAPK8IP1Q9UQF2 711 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 STX10O60499 249 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 SLFN14P0C7P3 912 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 H2AFXP16104 143 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 CCT6AP40227 531 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 FUT2Q10981 343 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 SRBD1Q8N5C6 995 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 IGSF22Q8N9C0 903 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 CELF1Q92879 486 aaKnown RBP11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 FAM84BQ96KN1 310 aaPredicted RBP11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 C4AP0C0L4 1744 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 C4BP0C0L5 1744 aa11.26□□□□□ -0.61
UBE2D3-203ENST00000343106 AKR1B15C9JRZ8 316 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 PRPF3O43395 683 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 NLRP5P59047 1200 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 TROAPQ12815 778 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 TTC38Q5R3I4 469 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 TEX35Q5T0J7 233 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 PPFIBP1Q86W92 1011 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 MARCH10Q8NA82 808 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 MRPL44Q9H9J2 332 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 CTNND2Q9UQB3 1225 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 RTL9Q8NET4 1388 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 MYO1BO43795 1136 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 TUBB4AP04350 444 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 BMS1Q14692 1282 aaKnown RBP11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 ELOA2Q8IYF1 753 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 TRIML1Q8N9V2 468 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 SPATA20Q8TB22 786 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 CCDC12Q8WUD4 166 aaPredicted RBP11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 BRMS1Q9HCU9 246 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 FHOD1Q9Y613 1164 aa11.25□□□□□ -0.61
UBE2D3-203ENST00000343106 TADA3O75528 432 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 MECOMQ03112 1051 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 DPYDQ12882 1025 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 TERF2Q15554 542 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 SPATA1Q5VX52 437 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 TMCO3Q6UWJ1 677 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 CTCFLQ8NI51 663 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 CCDC34Q96HJ3 373 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 ANAPC4Q9UJX5 808 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 SYNRGQ9UMZ2 1314 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 A0A1B0GTH6 734 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 ERICH4A6NGS2 130 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 NUTM2BA6NNL0 878 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 NUTM2EB1AL46 878 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 ERCC5P28715 1186 aaPredicted RBP11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 CASP14P31944 242 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 PPP2R3AQ06190 1150 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 RRAGBQ5VZM2 374 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 RAD9BQ6WBX8 426 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 TMTC3Q6ZXV5 915 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 RASGRP4Q8TDF6 673 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 PLIN2Q99541 437 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 VPS16Q9H269 839 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 NID2Q14112 1375 aa11.24□□□□□ -0.61
UBE2D3-203ENST00000343106 SHANK3Q9BYB0 1731 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 MYO5AQ9Y4I1 1855 aaKnown RBP11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 TSPY2A6NKD2 308 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 PPP1R3GB7ZBB8 358 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 POLR3GO15318 223 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 PNMA6AP0CW24 399 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 PRDX5P30044 214 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 CUL4BQ13620 913 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 NPY5RQ15761 445 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 FCHSD1Q86WN1 690 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 LRP6O75581 1613 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 DISP2A7MBM2 1401 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 EFCAB8A8MWE9 144 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 GABPB1Q06547 395 aaPredicted RBP11.23□□□□□ -0.61
UBE2D3-203ENST00000343106 IL17AQ16552 155 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms