RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SPDYE1Q8NFV5 336 aaPredicted RBP19.39■□□□□ 0.69
SMAD4-201ENST00000342988 PRAM1Q96QH2 718 aa19.39■□□□□ 0.69
SMAD4-201ENST00000342988 MARCKSP29966 332 aaPredicted RBP19.38■□□□□ 0.69
SMAD4-201ENST00000342988 HECW1Q76N89 1606 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 TNNI2P48788 182 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 CTNND2Q9UQB3 1225 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 TRPC6Q9Y210 931 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 STX19Q8N4C7 294 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 ZRANB1Q9UGI0 708 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 SYNRGQ9UMZ2 1314 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 SYCE1LA8MT33 242 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 SUN1O94901 812 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 PRPF6O94906 941 aaKnown RBP19.38■□□□□ 0.69
SMAD4-201ENST00000342988 GNA14O95837 355 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 MCF2P10911 925 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 DNM2P50570 870 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 SNX1Q13596 522 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 DBF4Q9UBU7 674 aaPredicted RBP19.38■□□□□ 0.69
SMAD4-201ENST00000342988 ZBTB21Q9ULJ3 1066 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 KPNA2P52292 529 aaKnown RBP19.38■□□□□ 0.69
SMAD4-201ENST00000342988 YY1AP1Q9H869 796 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 WIZO95785 1651 aa19.38■□□□□ 0.69
SMAD4-201ENST00000342988 CLTAP09496 248 aa19.37■□□□□ 0.69
SMAD4-201ENST00000342988 SPOUT1Q5T280 376 aaKnown RBP19.37■□□□□ 0.69
SMAD4-201ENST00000342988 MCF2L2Q86YR7 1114 aa19.37■□□□□ 0.69
SMAD4-201ENST00000342988 SMC5Q8IY18 1101 aa19.37■□□□□ 0.69
SMAD4-201ENST00000342988 ERBINQ96RT1 1412 aa19.37■□□□□ 0.69
SMAD4-201ENST00000342988 THAP12O43422 761 aa19.37■□□□□ 0.69
SMAD4-201ENST00000342988 PSDA5PKW4 1024 aaPredicted RBP19.37■□□□□ 0.69
SMAD4-201ENST00000342988 ANGPTL2Q9UKU9 493 aa19.37■□□□□ 0.69
SMAD4-201ENST00000342988 CDCA7LQ96GN5 454 aa19.37■□□□□ 0.69
SMAD4-201ENST00000342988 RFC4P35249 363 aa19.37■□□□□ 0.69
SMAD4-201ENST00000342988 IGSF22Q8N9C0 903 aa19.37■□□□□ 0.69
SMAD4-201ENST00000342988 MKL2Q9ULH7 1088 aa19.37■□□□□ 0.69
SMAD4-201ENST00000342988 RPS6KA1Q15418 735 aa19.36■□□□□ 0.69
SMAD4-201ENST00000342988 C4orf50Q6ZRC1 276 aa19.36■□□□□ 0.69
SMAD4-201ENST00000342988 LRRC8CQ8TDW0 803 aa19.36■□□□□ 0.69
SMAD4-201ENST00000342988 SERPINB2P05120 415 aa19.36■□□□□ 0.69
SMAD4-201ENST00000342988 ATG16L1Q676U5 607 aa19.36■□□□□ 0.69
SMAD4-201ENST00000342988 DNAJC25Q9H1X3 360 aa19.36■□□□□ 0.69
SMAD4-201ENST00000342988 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.36■□□□□ 0.69
SMAD4-201ENST00000342988 CTNNA1P35221 906 aaKnown RBP19.36■□□□□ 0.69
SMAD4-201ENST00000342988 PHKBQ93100 1093 aa19.36■□□□□ 0.69
SMAD4-201ENST00000342988 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.36■□□□□ 0.69
SMAD4-201ENST00000342988 EPRSP07814 1512 aaKnown RBP19.36■□□□□ 0.69
SMAD4-201ENST00000342988 DDX41Q9UJV9 622 aaKnown RBP19.36■□□□□ 0.69
SMAD4-201ENST00000342988 LDHAL6AQ6ZMR3 332 aa19.36■□□□□ 0.69
SMAD4-201ENST00000342988 PACSIN2Q9UNF0 486 aaPredicted RBP19.36■□□□□ 0.69
SMAD4-201ENST00000342988 CCDC169A6NNP5 214 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 ZBBXA8MT70 800 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 WBP4O75554 376 aaKnown RBP19.35■□□□□ 0.69
SMAD4-201ENST00000342988 HAND2P61296 217 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 BBOF1Q8ND07 529 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 IFIH1Q9BYX4 1025 aaKnown RBP19.35■□□□□ 0.69
SMAD4-201ENST00000342988 MRFAP1L1Q96HT8 127 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 TRAIPQ9BWF2 469 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 MYO18AQ92614 2054 aaKnown RBP19.35■□□□□ 0.69
SMAD4-201ENST00000342988 MAP3K7O43318 606 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 TBC1D8BQ0IIM8 1120 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 USP48Q86UV5 1035 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 ENOX1Q8TC92 643 aaKnown RBP19.35■□□□□ 0.69
SMAD4-201ENST00000342988 BMP2KLQ5H9B9 411 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 CNPY2Q9Y2B0 182 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 STAM2O75886 525 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 TXNDC2Q86VQ3 553 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 GSNP06396 782 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 TTC19Q6DKK2 380 aaPredicted RBP19.35■□□□□ 0.69
SMAD4-201ENST00000342988 NOP9Q86U38 636 aaKnown RBP19.35■□□□□ 0.69
SMAD4-201ENST00000342988 CCDC8Q9H0W5 538 aaPredicted RBP19.35■□□□□ 0.69
SMAD4-201ENST00000342988 UPF3AQ9H1J1 476 aaKnown RBP19.35■□□□□ 0.69
SMAD4-201ENST00000342988 SYTL2Q9HCH5 934 aa19.35■□□□□ 0.69
SMAD4-201ENST00000342988 HFM1A2PYH4 1435 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 MYL5Q02045 173 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 RAPH1Q70E73 1250 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 PICK1Q9NRD5 415 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 AMFRQ9UKV5 643 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 GIPC2Q8TF65 315 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 CCDC78A2IDD5 438 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 BSPRYQ5W0U4 402 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 ST13P4Q8IZP2 240 aaPredicted RBP19.34■□□□□ 0.69
SMAD4-201ENST00000342988 PIP4K2CQ8TBX8 421 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 TRIM31Q9BZY9 425 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 PTCD1O75127 700 aaKnown RBP19.34■□□□□ 0.69
SMAD4-201ENST00000342988 SERPINB10P48595 397 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 PARD3BQ8TEW8 1205 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 TRIM45Q9H8W5 580 aaPredicted RBP19.34■□□□□ 0.69
SMAD4-201ENST00000342988 CAPN9O14815 690 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 MCMDC2Q4G0Z9 681 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 TSC1Q92574 1164 aa19.34■□□□□ 0.69
SMAD4-201ENST00000342988 GOLGA8RI6L899 631 aa19.33■□□□□ 0.69
SMAD4-201ENST00000342988 C16orf72Q14CZ0 275 aa19.33■□□□□ 0.69
SMAD4-201ENST00000342988 CCDC84Q86UT8 332 aaPredicted RBP19.33■□□□□ 0.69
SMAD4-201ENST00000342988 VEZTQ9HBM0 779 aa19.33■□□□□ 0.69
SMAD4-201ENST00000342988 BZW2Q9Y6E2 419 aaKnown RBP19.33■□□□□ 0.69
SMAD4-201ENST00000342988 GNL1P36915 607 aaPredicted RBP19.33■□□□□ 0.69
SMAD4-201ENST00000342988 OR9Q1Q8NGQ5 310 aa19.33■□□□□ 0.69
SMAD4-201ENST00000342988 SLC4A4Q9Y6R1 1079 aa19.33■□□□□ 0.69
SMAD4-201ENST00000342988 PTPRGP23470 1445 aa19.33■□□□□ 0.69
SMAD4-201ENST00000342988 CCNT1O60563 726 aaKnown RBP19.33■□□□□ 0.69
SMAD4-201ENST00000342988 HLA-DPA1P20036 260 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms