RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 RCAN1P53805 252 aa16.9■□□□□ 0.3
PBX3-201ENST00000342287 SEC23AQ15436 765 aa16.9■□□□□ 0.3
PBX3-201ENST00000342287 ICE2Q659A1 982 aa16.9■□□□□ 0.3
PBX3-201ENST00000342287 USP17L3A6NCW0 530 aa16.9■□□□□ 0.3
PBX3-201ENST00000342287 USP17L4A6NCW7 530 aa16.9■□□□□ 0.3
PBX3-201ENST00000342287 ADCY5O95622 1261 aa16.9■□□□□ 0.3
PBX3-201ENST00000342287 USP17L1Q7RTZ2 530 aa16.9■□□□□ 0.3
PBX3-201ENST00000342287 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
PBX3-201ENST00000342287 PPIP5K2O43314 1243 aa16.89■□□□□ 0.3
PBX3-201ENST00000342287 RXRAP19793 462 aa16.89■□□□□ 0.3
PBX3-201ENST00000342287 DACT2Q5SW24 774 aa16.89■□□□□ 0.3
PBX3-201ENST00000342287 FAM43BQ6ZT52 329 aaPredicted RBP16.89■□□□□ 0.3
PBX3-201ENST00000342287 FERMT3Q86UX7 667 aa16.89■□□□□ 0.3
PBX3-201ENST00000342287 TEKT1Q969V4 418 aa16.89■□□□□ 0.3
PBX3-201ENST00000342287 PSMD1Q99460 953 aa16.89■□□□□ 0.3
PBX3-201ENST00000342287 PPFIA3O75145 1194 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 CDC27P30260 824 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 SLC4A8Q2Y0W8 1093 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 ENAHQ8N8S7 591 aaPredicted RBP16.89■□□□□ 0.29
PBX3-201ENST00000342287 MYL10Q9BUA6 226 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 ORC3Q9UBD5 711 aaPredicted RBP16.89■□□□□ 0.29
PBX3-201ENST00000342287 SAP30BPQ9UHR5 308 aaKnown RBP16.89■□□□□ 0.29
PBX3-201ENST00000342287 PYCARDQ9ULZ3 195 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 FLT1P17948 1338 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 ROBO3Q96MS0 1386 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 CYP2C19P33261 490 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 SCNN1DP51172 638 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 CCDC144CPQ8IYA2 1237 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 ZSCAN16Q9H4T2 348 aaPredicted RBP16.89■□□□□ 0.29
PBX3-201ENST00000342287 ZNF287Q9HBT7 754 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 CEP83Q9Y592 693 aa16.89■□□□□ 0.29
PBX3-201ENST00000342287 DLEC1Q9Y238 1755 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 PLCD1P51178 756 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 IFIT1BQ5T764 474 aaKnown RBP16.88■□□□□ 0.29
PBX3-201ENST00000342287 MKNK2Q9HBH9 465 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 FAM217BQ9NTX9 383 aaPredicted RBP16.88■□□□□ 0.29
PBX3-201ENST00000342287 PIM2Q9P1W9 311 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 CNPY2Q9Y2B0 182 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 NID2Q14112 1375 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 CCDC196A0A1B0GTZ2 297 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 TSPY2A6NKD2 308 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 TRIM66O15016 1216 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 DNM1Q05193 864 aaKnown RBP16.88■□□□□ 0.29
PBX3-201ENST00000342287 PPP2R5BQ15173 497 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 SOGA3Q5TF21 947 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 USP48Q86UV5 1035 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 EGFL6Q8IUX8 553 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 ZNF654Q8IZM8 581 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 TMEM87AQ8NBN3 555 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 KIAA1524Q8TCG1 905 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 DYNLL2Q96FJ2 89 aa16.88■□□□□ 0.29
PBX3-201ENST00000342287 LAMB1P07942 1786 aa16.87■□□□□ 0.29
PBX3-201ENST00000342287 HDLBPQ00341 1268 aaKnown RBP16.87■□□□□ 0.29
PBX3-201ENST00000342287 R3HDM1Q15032 1099 aaKnown RBP16.87■□□□□ 0.29
PBX3-201ENST00000342287 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
PBX3-201ENST00000342287 NTRK3Q16288 839 aa16.87■□□□□ 0.29
PBX3-201ENST00000342287 FANCBQ8NB91 859 aa16.87■□□□□ 0.29
PBX3-201ENST00000342287 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
PBX3-201ENST00000342287 USP40Q9NVE5 1235 aa16.87■□□□□ 0.29
PBX3-201ENST00000342287 IARSP41252 1262 aaKnown RBP16.86■□□□□ 0.29
PBX3-201ENST00000342287 CRKP46108 304 aa16.86■□□□□ 0.29
PBX3-201ENST00000342287 RTN1Q16799 776 aa16.86■□□□□ 0.29
PBX3-201ENST00000342287 APOBEC3HQ6NTF7 200 aaKnown RBP16.86■□□□□ 0.29
PBX3-201ENST00000342287 CATIPQ7Z7H3 387 aa16.86■□□□□ 0.29
PBX3-201ENST00000342287 KIAA0825Q8IV33 1275 aa16.86■□□□□ 0.29
PBX3-201ENST00000342287 VPS33BQ9H267 617 aa16.86■□□□□ 0.29
PBX3-201ENST00000342287 TFAP4Q01664 338 aa16.86■□□□□ 0.29
PBX3-201ENST00000342287 RESTQ13127 1097 aa16.86■□□□□ 0.29
PBX3-201ENST00000342287 ZNF444Q8N0Y2 327 aaPredicted RBP16.86■□□□□ 0.29
PBX3-201ENST00000342287 C8orf76Q96K31 380 aa16.86■□□□□ 0.29
PBX3-201ENST00000342287 ZDHHC15Q96MV8 337 aa16.86■□□□□ 0.29
PBX3-201ENST00000342287 CCDC172P0C7W6 258 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 FOSBP53539 338 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 KRT85P78386 507 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 ILDR1Q86SU0 546 aaPredicted RBP16.85■□□□□ 0.29
PBX3-201ENST00000342287 NUP133Q8WUM0 1156 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 KIF13BQ9NQT8 1826 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 MBD3O95983 291 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 CALM1P0DP23 149 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 CALM2P0DP24 149 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 CALM3P0DP25 149 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 IFNAR1P17181 557 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 CCDC178Q5BJE1 867 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 C16orf86Q6ZW13 317 aa16.85■□□□□ 0.29
PBX3-201ENST00000342287 GOLGA6L6A8MZA4 724 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 WDHD1O75717 1129 aaPredicted RBP16.84■□□□□ 0.29
PBX3-201ENST00000342287 SSRP1Q08945 709 aaKnown RBP16.84■□□□□ 0.29
PBX3-201ENST00000342287 PICALMQ13492 652 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 CDC42EP5Q6NZY7 148 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 SYT10Q6XYQ8 523 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 FBXO18Q8NFZ0 1043 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 UPF1Q92900 1129 aaKnown RBP eCLIP16.84■□□□□ 0.29
PBX3-201ENST00000342287 PHKBQ93100 1093 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 NAV1Q8NEY1 1877 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 YDJCA8MPS7 323 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 NMT2O60551 498 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 SYCP1Q15431 976 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 DALRD3Q5D0E6 543 aaKnown RBP16.84■□□□□ 0.29
PBX3-201ENST00000342287 TTC6Q86TZ1 520 aa16.84■□□□□ 0.29
PBX3-201ENST00000342287 LARGE2Q8N3Y3 721 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms