RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CCDC96Q2M329 555 aa15.02■□□□□ -0
COL18A1-201ENST00000342220 PDILTQ8N807 584 aa15.02■□□□□ -0
COL18A1-201ENST00000342220 ARPP21Q9UBL0 812 aaPredicted RBP15.02■□□□□ -0
COL18A1-201ENST00000342220 MRVI1Q9Y6F6 885 aa15.02■□□□□ -0
COL18A1-201ENST00000342220 MYH3P11055 1940 aa15.02■□□□□ -0
COL18A1-201ENST00000342220 ELP1O95163 1332 aa15.02■□□□□ -0
COL18A1-201ENST00000342220 TYRO3Q06418 890 aa15.02■□□□□ -0
COL18A1-201ENST00000342220 USP17L2Q6R6M4 530 aa15.02■□□□□ -0
COL18A1-201ENST00000342220 ILDR1Q86SU0 546 aaPredicted RBP15.02■□□□□ -0
COL18A1-201ENST00000342220 LUZP1Q86V48 1076 aa15.02■□□□□ -0
COL18A1-201ENST00000342220 RTFDC1Q9BY42 306 aaPredicted RBP15.02■□□□□ -0
COL18A1-201ENST00000342220 DDX4Q9NQI0 724 aaKnown RBP15.02■□□□□ -0
COL18A1-201ENST00000342220 PYCARDQ9ULZ3 195 aa15.02■□□□□ -0
COL18A1-201ENST00000342220 MYO5AQ9Y4I1 1855 aaKnown RBP15.02□□□□□ -0.01
COL18A1-201ENST00000342220 HEATR3Q7Z4Q2 680 aa15.02□□□□□ -0.01
COL18A1-201ENST00000342220 PNMA1Q8ND90 353 aa15.02□□□□□ -0.01
COL18A1-201ENST00000342220 LEO1Q8WVC0 666 aaPredicted RBP15.02□□□□□ -0.01
COL18A1-201ENST00000342220 JDP2Q8WYK2 163 aa15.02□□□□□ -0.01
COL18A1-201ENST00000342220 ZBTB9Q96C00 473 aa15.02□□□□□ -0.01
COL18A1-201ENST00000342220 ALDH8A1Q9H2A2 487 aaPredicted RBP15.02□□□□□ -0.01
COL18A1-201ENST00000342220 CLIP2Q9UDT6 1046 aa15.02□□□□□ -0.01
COL18A1-201ENST00000342220 CASZ1Q86V15 1759 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 A0A1B0GVL5 298 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 CDK8P49336 464 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 ALX1Q15699 326 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 STAG2Q8N3U4 1231 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 FAM200AQ8TCP9 573 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 RASGRP4Q8TDF6 673 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 TNMDQ9H2S6 317 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 CLIC4Q9Y696 253 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 FLT1P17948 1338 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 HMGB2P26583 209 aaKnown RBP15.01□□□□□ -0.01
COL18A1-201ENST00000342220 SDF4Q9BRK5 362 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 SCAND2PQ9GZW5 306 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-201ENST00000342220 SPTLC3Q9NUV7 552 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 ZMYM6O95789 1325 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 KIF28PB7ZC32 967 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 VEGFAP15692 232 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-201ENST00000342220 CCDC84Q86UT8 332 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-201ENST00000342220 CABP5Q9NP86 173 aa15.01□□□□□ -0.01
COL18A1-201ENST00000342220 BIN1O00499 593 aa15□□□□□ -0.01
COL18A1-201ENST00000342220 NLRP5P59047 1200 aa15□□□□□ -0.01
COL18A1-201ENST00000342220 C12orf60Q5U649 245 aa15□□□□□ -0.01
COL18A1-201ENST00000342220 PRAMEF18Q5VWM3 479 aa15□□□□□ -0.01
COL18A1-201ENST00000342220 DIS3L2Q8IYB7 885 aaKnown RBP15□□□□□ -0.01
COL18A1-201ENST00000342220 SPICE1Q8N0Z3 855 aa15□□□□□ -0.01
COL18A1-201ENST00000342220 SHTN1A0MZ66 631 aa15□□□□□ -0.01
COL18A1-201ENST00000342220 ANO6Q4KMQ2 910 aa15□□□□□ -0.01
COL18A1-201ENST00000342220 CDC42EP5Q6NZY7 148 aa15□□□□□ -0.01
COL18A1-201ENST00000342220 IL1R1P14778 569 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 SLC16A2P36021 539 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 CCDC93Q567U6 631 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 CCDC73Q6ZRK6 1079 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 NIM1KQ8IY84 436 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 FBXO18Q8NFZ0 1043 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 OXER1Q8TDS5 423 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 PIM2Q9P1W9 311 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 CCDC196A0A1B0GTZ2 297 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 FAM205CA6NFA0 338 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 TULP1O00294 542 aaPredicted RBP14.99□□□□□ -0.01
COL18A1-201ENST00000342220 HLA-DOAP06340 250 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 SNAP25P60880 206 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 CFAP100Q494V2 611 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 FSIP1Q8NA03 581 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 KIAA1524Q8TCG1 905 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 PGBD1Q96JS3 809 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 CFAP45Q9UL16 551 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 NR1I2O75469 434 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 ARHGAP27Q6ZUM4 889 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 PODNQ7Z5L7 613 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 CCAR1Q8IX12 1150 aaKnown RBP14.99□□□□□ -0.01
COL18A1-201ENST00000342220 RASSF8Q8NHQ8 419 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 PRIMPOLQ96LW4 560 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 ZNF396Q96N95 335 aaPredicted RBP14.99□□□□□ -0.01
COL18A1-201ENST00000342220 CBX8Q9HC52 389 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 TMOD2Q9NZR1 351 aa14.99□□□□□ -0.01
COL18A1-201ENST00000342220 PSMD14O00487 310 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 PLCG2P16885 1265 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 RASSF7Q02833 373 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 DALRD3Q5D0E6 543 aaKnown RBP14.98□□□□□ -0.01
COL18A1-201ENST00000342220 NBPF11Q86T75 865 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 CEP95Q96GE4 821 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 PRMT6Q96LA8 375 aaPredicted RBP14.98□□□□□ -0.01
COL18A1-201ENST00000342220 LLPHQ9BRT6 129 aaKnown RBP14.98□□□□□ -0.01
COL18A1-201ENST00000342220 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.98□□□□□ -0.01
COL18A1-201ENST00000342220 LRP5O75197 1615 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 SCN7AQ01118 1682 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 PTGS1P23219 599 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 RESTQ13127 1097 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 RGS22Q8NE09 1264 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 TAF1LQ8IZX4 1826 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 AKR1B1P15121 316 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 TMTC2Q8N394 836 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 CLIC6Q96NY7 704 aa14.98□□□□□ -0.01
COL18A1-201ENST00000342220 DLGAP5Q15398 846 aa14.97□□□□□ -0.01
COL18A1-201ENST00000342220 SMARCC2Q8TAQ2 1214 aa14.97□□□□□ -0.01
COL18A1-201ENST00000342220 CLSTN2Q9H4D0 955 aa14.97□□□□□ -0.01
COL18A1-201ENST00000342220 DDX19AQ9NUU7 478 aaKnown RBP14.97□□□□□ -0.01
COL18A1-201ENST00000342220 TNRC6CQ9HCJ0 1690 aaKnown RBP14.97□□□□□ -0.01
COL18A1-201ENST00000342220 BRD2P25440 801 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms