RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 CENPQQ7L2Z9 268 aaPredicted RBP4.28□□□□□ -1.72
CCDC66-202ENST00000341455 OTOP1Q7RTM1 612 aa4.28□□□□□ -1.72
CCDC66-202ENST00000341455 ZNF804AQ7Z570 1209 aa4.28□□□□□ -1.72
CCDC66-202ENST00000341455 METTL16Q86W50 562 aaKnown RBP4.28□□□□□ -1.72
CCDC66-202ENST00000341455 RHPN1Q8TCX5 695 aa4.28□□□□□ -1.72
CCDC66-202ENST00000341455 TBC1D22AQ8WUA7 517 aa4.28□□□□□ -1.72
CCDC66-202ENST00000341455 UCN2Q96RP3 112 aa4.28□□□□□ -1.72
CCDC66-202ENST00000341455 TFIP11Q9UBB9 837 aaKnown RBP4.28□□□□□ -1.72
CCDC66-202ENST00000341455 MAST3O60307 1309 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 MYH1P12882 1939 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 AP1G2O75843 785 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 CENPBP07199 599 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 CFHP08603 1231 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 SLC5A1P13866 664 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 DIXDC1Q155Q3 683 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 LRRC24Q50LG9 513 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 MAP1SQ66K74 1059 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 SLC4A10Q6U841 1118 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 DPP8Q6V1X1 898 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 BICDL1Q6ZP65 573 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 PI4K2BQ8TCG2 481 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 RWDD1Q9H446 243 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 PTPRFP10586 1907 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 RNF40O75150 1001 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 WNT7BP56706 349 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 QPCTQ16769 361 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 HHIPL2Q6UWX4 724 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 LDHAL6AQ6ZMR3 332 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 ZGPATQ8N5A5 531 aaKnown RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 FRAT1Q92837 279 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 SHISA4Q96DD7 197 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 SPSB2Q99619 263 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 HAUS7Q99871 368 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 PUS3Q9BZE2 481 aaKnown RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 DENND2AQ9ULE3 1009 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 GPR37L1O60883 481 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 FMNL1O95466 1100 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 BRD2P25440 801 aaKnown RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 GJA8P48165 433 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 HIRAP54198 1017 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 ATP2B3Q16720 1220 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 WASHC4Q2M389 1173 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 RSBN1LQ6PCB5 846 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 SLC17A8Q8NDX2 589 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 THAP11Q96EK4 314 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 COL25A1Q9BXS0 654 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 LRRCC1Q9C099 1032 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 ALG2Q9H553 416 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 CD209Q9NNX6 404 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 ADGRG1Q9Y653 693 aa4.27□□□□□ -1.73
CCDC66-202ENST00000341455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.27□□□□□ -1.73
CCDC66-202ENST00000341455 LRRC37A2A6NM11 1700 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 TCRBV5S4A2TA0A5A2 114 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 PLIN1O60240 522 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 ECE2O60344 883 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 OATP04181 439 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 IFIT1P09914 478 aaKnown RBP4.26□□□□□ -1.73
CCDC66-202ENST00000341455 USP17L8P0C7I0 530 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 VAC14Q08AM6 782 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 TFCP2Q12800 502 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 PLA2G2CQ5R387 149 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 PHLDB3Q6NSJ2 640 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 NBPF11Q86T75 865 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 APOBEC3FQ8IUX4 373 aaKnown RBP4.26□□□□□ -1.73
CCDC66-202ENST00000341455 WDR66Q8TBY9 1149 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 GIPC2Q8TF65 315 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 CDCA5Q96FF9 252 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 MPHOSPH8Q99549 860 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 MTMR10Q9NXD2 777 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 DACH1Q9UI36 760 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 DBNLQ9UJU6 430 aaKnown RBP4.26□□□□□ -1.73
CCDC66-202ENST00000341455 NR2E3Q9Y5X4 410 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 NDUFB9Q9Y6M9 179 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 MYH8P13535 1937 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 RLFQ13129 1914 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 A0A1B0GUL7 405 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 TTC24A2A3L6 582 aaPredicted RBP4.26□□□□□ -1.73
CCDC66-202ENST00000341455 USP17L3A6NCW0 530 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 USP17L4A6NCW7 530 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 TLL1O43897 1013 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 GTF2E1P29083 439 aaPredicted RBP4.26□□□□□ -1.73
CCDC66-202ENST00000341455 HUNKP57058 714 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 CSPP1Q1MSJ5 1256 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 AKNAD1Q5T1N1 836 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 B4GALNT3Q6L9W6 998 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 USP17L1Q7RTZ2 530 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 EXOC6Q8TAG9 804 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 PXYLP1Q8TE99 480 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 EAF2Q96CJ1 260 aaPredicted RBP4.26□□□□□ -1.73
CCDC66-202ENST00000341455 ZDHHC15Q96MV8 337 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 CEP126Q9P2H0 1117 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 SUPT16HQ9Y5B9 1047 aaKnown RBP4.26□□□□□ -1.73
CCDC66-202ENST00000341455 PLIN4Q96Q06 1357 aa4.26□□□□□ -1.73
CCDC66-202ENST00000341455 RAD50Q92878 1312 aa4.25□□□□□ -1.73
CCDC66-202ENST00000341455 H7C1D1 291 aa4.25□□□□□ -1.73
CCDC66-202ENST00000341455 UFL1O94874 794 aa4.25□□□□□ -1.73
CCDC66-202ENST00000341455 EPS15P42566 896 aa4.25□□□□□ -1.73
CCDC66-202ENST00000341455 GMPSP49915 693 aaPredicted RBP4.25□□□□□ -1.73
CCDC66-202ENST00000341455 CXCL9Q07325 125 aa4.25□□□□□ -1.73
CCDC66-202ENST00000341455 G3BP1Q13283 466 aaKnown RBP eCLIP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms