RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ZNF18P17022 549 aa16.65■□□□□ 0.26
TDP2-201ENST00000341060 KRT2P35908 639 aa16.65■□□□□ 0.26
TDP2-201ENST00000341060 ENOX1Q8TC92 643 aaKnown RBP16.65■□□□□ 0.26
TDP2-201ENST00000341060 FAM84BQ96KN1 310 aaPredicted RBP16.65■□□□□ 0.26
TDP2-201ENST00000341060 AATFQ9NY61 560 aaKnown RBP eCLIP16.65■□□□□ 0.26
TDP2-201ENST00000341060 VPS54Q9P1Q0 977 aa16.65■□□□□ 0.26
TDP2-201ENST00000341060 BAZ2BQ9UIF8 2168 aaKnown RBP16.65■□□□□ 0.26
TDP2-201ENST00000341060 TRIM75PA6NK02 468 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 TMEM232C9JQI7 657 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 SLU7O95391 586 aaKnown RBP16.64■□□□□ 0.25
TDP2-201ENST00000341060 DYNLL1P63167 89 aaKnown RBP16.64■□□□□ 0.25
TDP2-201ENST00000341060 CBX1P83916 185 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 TROAPQ12815 778 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 THSD7AQ9UPZ6 1657 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 CYP2D7A0A087X1C5 515 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 SEMA3EO15041 775 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 DDAH1O94760 285 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 FMR1Q06787 632 aaKnown RBP eCLIP16.64■□□□□ 0.25
TDP2-201ENST00000341060 CTR9Q6PD62 1173 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 SYT10Q6XYQ8 523 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 FCHSD1Q86WN1 690 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 PDILTQ8N807 584 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 NFE2L3Q9Y4A8 694 aa16.64■□□□□ 0.25
TDP2-201ENST00000341060 PDS5AQ29RF7 1337 aaKnown RBP16.63■□□□□ 0.25
TDP2-201ENST00000341060 FAM205CA6NFA0 338 aa16.63■□□□□ 0.25
TDP2-201ENST00000341060 RGL2O15211 777 aa16.63■□□□□ 0.25
TDP2-201ENST00000341060 ONECUT3O60422 494 aaPredicted RBP16.63■□□□□ 0.25
TDP2-201ENST00000341060 PLEKHA8P1O95397 391 aa16.63■□□□□ 0.25
TDP2-201ENST00000341060 ATP2B1P20020 1258 aa16.63■□□□□ 0.25
TDP2-201ENST00000341060 USP49Q70CQ1 688 aa16.63■□□□□ 0.25
TDP2-201ENST00000341060 BMP15O95972 392 aa16.63■□□□□ 0.25
TDP2-201ENST00000341060 TBX2Q13207 712 aaPredicted RBP16.63■□□□□ 0.25
TDP2-201ENST00000341060 TMEM139Q8IV31 216 aa16.63■□□□□ 0.25
TDP2-201ENST00000341060 GRAMD1CQ8IYS0 662 aa16.63■□□□□ 0.25
TDP2-201ENST00000341060 CELF1Q92879 486 aaKnown RBP16.63■□□□□ 0.25
TDP2-201ENST00000341060 NSUN4Q96CB9 384 aaKnown RBP16.63■□□□□ 0.25
TDP2-201ENST00000341060 CCDC34Q96HJ3 373 aa16.63■□□□□ 0.25
TDP2-201ENST00000341060 PHLPP2Q6ZVD8 1323 aa16.62■□□□□ 0.25
TDP2-201ENST00000341060 PRDM1O75626 825 aa16.62■□□□□ 0.25
TDP2-201ENST00000341060 ETF1P62495 437 aaKnown RBP16.62■□□□□ 0.25
TDP2-201ENST00000341060 ZNF827Q17R98 1081 aa16.62■□□□□ 0.25
TDP2-201ENST00000341060 CCDC93Q567U6 631 aa16.62■□□□□ 0.25
TDP2-201ENST00000341060 EARS2Q5JPH6 523 aaKnown RBP16.62■□□□□ 0.25
TDP2-201ENST00000341060 TMTC3Q6ZXV5 915 aa16.62■□□□□ 0.25
TDP2-201ENST00000341060 FBXO33Q7Z6M2 555 aa16.62■□□□□ 0.25
TDP2-201ENST00000341060 LINC00116Q8NCU8 138 aa16.62■□□□□ 0.25
TDP2-201ENST00000341060 FERMT2Q96AC1 680 aa16.62■□□□□ 0.25
TDP2-201ENST00000341060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.62■□□□□ 0.25
TDP2-201ENST00000341060 V9GY48 417 aaPredicted RBP16.62■□□□□ 0.25
TDP2-201ENST00000341060 SPDYE4A6NLX3 237 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 ARHGAP6O43182 974 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 ORC4O43929 436 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 ERCC5P28715 1186 aaPredicted RBP16.61■□□□□ 0.25
TDP2-201ENST00000341060 PLCD1P51178 756 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 NPY5RQ15761 445 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 SLC10A5Q5PT55 438 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 TNFRSF25Q93038 417 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 BRMS1Q9HCU9 246 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 SBF2Q86WG5 1849 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 CNTNAP5Q8WYK1 1306 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 A0A087X0B3 334 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 USP17L12C9JPN9 530 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 USP17L21D6R901 530 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 HSP90AA4PQ58FG1 418 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 CT47A1Q5JQC4 288 aaPredicted RBP16.61■□□□□ 0.25
TDP2-201ENST00000341060 ZNF397Q8NF99 534 aaPredicted RBP16.61■□□□□ 0.25
TDP2-201ENST00000341060 MED15Q96RN5 788 aa16.61■□□□□ 0.25
TDP2-201ENST00000341060 hCG_1642624A0A1W2PR95 340 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 SLFN14P0C7P3 912 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 CDK11BP21127 795 aaKnown RBP16.6■□□□□ 0.25
TDP2-201ENST00000341060 MECOMQ03112 1051 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 ELF2Q15723 593 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 SPECC1LQ69YQ0 1117 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 HOMER1Q86YM7 354 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 TRMT44Q8IYL2 757 aaKnown RBP16.6■□□□□ 0.25
TDP2-201ENST00000341060 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 OGFRQ9NZT2 677 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.6■□□□□ 0.25
TDP2-201ENST00000341060 V9GYY5 206 aaPredicted RBP16.6■□□□□ 0.25
TDP2-201ENST00000341060 CNTNAP4Q9C0A0 1308 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 GOLGA8FQ08AF8 430 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 GOLGA8DPQ0D2H9 430 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 PTPN21Q16825 1174 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 TRIM65Q6PJ69 517 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 SH3RF1Q7Z6J0 888 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 REXO1L1PQ8IX06 675 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 SYMPKQ92797 1274 aaKnown RBP16.6■□□□□ 0.25
TDP2-201ENST00000341060 DHX58Q96C10 678 aa16.6■□□□□ 0.25
TDP2-201ENST00000341060 DCP1AQ9NPI6 582 aaPredicted RBP16.6■□□□□ 0.25
TDP2-201ENST00000341060 DDX41Q9UJV9 622 aaKnown RBP16.6■□□□□ 0.25
TDP2-201ENST00000341060 MYH8P13535 1937 aa16.59■□□□□ 0.25
TDP2-201ENST00000341060 ZSCAN12O43309 604 aa16.59■□□□□ 0.25
TDP2-201ENST00000341060 STX10O60499 249 aa16.59■□□□□ 0.25
TDP2-201ENST00000341060 ZSCAN20P17040 1043 aaPredicted RBP16.59■□□□□ 0.25
TDP2-201ENST00000341060 KLRK1P26718 216 aa16.59■□□□□ 0.25
TDP2-201ENST00000341060 GTF2E1P29083 439 aaPredicted RBP16.59■□□□□ 0.25
TDP2-201ENST00000341060 KCNQ4P56696 695 aa16.59■□□□□ 0.25
TDP2-201ENST00000341060 KMT5BQ4FZB7 885 aa16.59■□□□□ 0.25
TDP2-201ENST00000341060 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
TDP2-201ENST00000341060 CRNKL1Q9BZJ0 848 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms