RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 CCDC125Q86Z20 511 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 MSH6P52701 1360 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 EEF1DP29692 281 aaKnown RBP9.07□□□□□ -0.96
PKHD1-201ENST00000340994 GJC1P36383 396 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 ST5P78524 1137 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 RAD51AP2Q09MP3 1159 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 MUM1L1Q5H9M0 696 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 MAGEF1Q9HAY2 307 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 NEK2P51955 445 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 CUL4BQ13620 913 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 CSGALNACT2Q8N6G5 542 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 ARMC2Q8NEN0 867 aa9.07□□□□□ -0.96
PKHD1-201ENST00000340994 ARHGEF18Q6ZSZ5 1173 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 TRAF5O00463 557 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 CUL1Q13616 776 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 FAM135BQ49AJ0 1406 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 UHRF1BP1Q6BDS2 1440 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 LRRC8AQ8IWT6 810 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 DACT3Q96B18 629 aaPredicted RBP9.06□□□□□ -0.96
PKHD1-201ENST00000340994 LZTS2Q9BRK4 669 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 PALMDQ9NP74 551 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 STRN3Q13033 797 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 TAF11Q15544 211 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 NECAB1Q8N987 351 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 TRIM15Q9C019 465 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 PAG1Q9NWQ8 432 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 KCNG1Q9UIX4 513 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 SYCP2Q9BX26 1530 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 DEXIO95424 95 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 TRHP20396 242 aaPredicted RBP9.06□□□□□ -0.96
PKHD1-201ENST00000340994 TNFAIP3P21580 790 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 ANKRD2Q9GZV1 360 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 SPINK5Q9NQ38 1064 aaPredicted RBP9.06□□□□□ -0.96
PKHD1-201ENST00000340994 NUB1Q9Y5A7 615 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 DCTN3O75935 186 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 ABTB1Q969K4 478 aaPredicted RBP9.06□□□□□ -0.96
PKHD1-201ENST00000340994 DCTPP1Q9H773 170 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 ANGPTL3Q9Y5C1 460 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 YWHAEP62258 255 aaKnown RBP9.06□□□□□ -0.96
PKHD1-201ENST00000340994 RPS6KA2Q15349 733 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 DCAF17Q5H9S7 520 aaPredicted RBP9.06□□□□□ -0.96
PKHD1-201ENST00000340994 SLC12A2P55011 1212 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 IWS1Q96ST2 819 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 PPP2R2CQ9Y2T4 447 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 POLR3AO14802 1390 aaPredicted RBP9.06□□□□□ -0.96
PKHD1-201ENST00000340994 TTI1O43156 1089 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 CCDC61Q9Y6R9 512 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 KRIT1O00522 736 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 SYF2O95926 243 aaKnown RBP9.06□□□□□ -0.96
PKHD1-201ENST00000340994 SERPINB10P48595 397 aa9.06□□□□□ -0.96
PKHD1-201ENST00000340994 SEPT8Q92599 483 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 KRT9P35527 623 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 PDXDC1Q6P996 788 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 ZNF644Q9H582 1327 aaPredicted RBP9.05□□□□□ -0.96
PKHD1-201ENST00000340994 N4BP1O75113 896 aaKnown RBP9.05□□□□□ -0.96
PKHD1-201ENST00000340994 ASPHQ12797 758 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 MCM10Q7L590 875 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 NFE2L3Q9Y4A8 694 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 NR1H3Q13133 447 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 PPP1R2P3Q6NXS1 205 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 EMBQ6PCB8 327 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 CHMP2AO43633 222 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 PRPF6O94906 941 aaKnown RBP9.05□□□□□ -0.96
PKHD1-201ENST00000340994 IL15P40933 162 aaPredicted RBP9.05□□□□□ -0.96
PKHD1-201ENST00000340994 TMCO5AQ8N6Q1 288 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 CCDC8Q9H0W5 538 aaPredicted RBP9.05□□□□□ -0.96
PKHD1-201ENST00000340994 MRPL40Q9NQ50 206 aaKnown RBP9.05□□□□□ -0.96
PKHD1-201ENST00000340994 HMGXB3Q12766 1538 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 BAG2O95816 211 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 GUCY2CP25092 1073 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 SCYL3Q8IZE3 742 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 OR8K1Q8NGG5 319 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 LMBRD1Q9NUN5 540 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 SCHIP1Q9P0W5 487 aaPredicted RBP9.05□□□□□ -0.96
PKHD1-201ENST00000340994 IQSEC3Q9UPP2 1182 aaPredicted RBP9.05□□□□□ -0.96
PKHD1-201ENST00000340994 A0A1B0GVL5 298 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 MX2P20592 715 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 HELLSQ9NRZ9 838 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 MAPKBP1O60336 1514 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 SERPINI2O75830 405 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 C10orf76Q5T2E6 689 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 MRPL46Q9H2W6 279 aaKnown RBP9.05□□□□□ -0.96
PKHD1-201ENST00000340994 BATF3Q9NR55 127 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 KIF24Q5T7B8 1368 aa9.05□□□□□ -0.96
PKHD1-201ENST00000340994 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 CCDC184Q52MB2 194 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 MAP7D3Q8IWC1 876 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 CABP5Q9NP86 173 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 RPS6KB1P23443 525 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 ZNF354CQ86Y25 554 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 CCDC117Q8IWD4 279 aaPredicted RBP9.04□□□□□ -0.96
PKHD1-201ENST00000340994 PIP4K2CQ8TBX8 421 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 TMEM87BQ96K49 555 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 MAP3K2Q9Y2U5 619 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 MRFAP1Q9Y605 127 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 RAP1GDS1P52306 607 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 BIRC3Q13489 604 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 TMOD4Q9NZQ9 345 aa9.04□□□□□ -0.96
PKHD1-201ENST00000340994 ITGB1BP2Q9UKP3 347 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms