RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 SOX10P56693 466 aa16■□□□□ 0.15
SIRPB3P-201ENST00000340424 SLFNL1Q499Z3 407 aa16■□□□□ 0.15
SIRPB3P-201ENST00000340424 C12orf60Q5U649 245 aa16■□□□□ 0.15
SIRPB3P-201ENST00000340424 TMEM179Q6ZVK1 233 aa16■□□□□ 0.15
SIRPB3P-201ENST00000340424 CCDC17Q96LX7 622 aa16■□□□□ 0.15
SIRPB3P-201ENST00000340424 FEZ1Q99689 392 aa16■□□□□ 0.15
SIRPB3P-201ENST00000340424 KIAA1683Q9H0B3 1180 aa16■□□□□ 0.15
SIRPB3P-201ENST00000340424 ASCC2Q9H1I8 757 aaPredicted RBP16■□□□□ 0.15
SIRPB3P-201ENST00000340424 MYPNQ86TC9 1320 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L12C9JPN9 530 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L21D6R901 530 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 SHROOM1Q2M3G4 852 aaPredicted RBP15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 SBK1Q52WX2 424 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 C16orf86Q6ZW13 317 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 SMC5Q8IY18 1101 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 ZNF333Q96JL9 665 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 FSD1Q9BTV5 496 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 RBBP6Q7Z6E9 1792 aaKnown RBP15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 MYH8P13535 1937 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 BRCA2P51587 3418 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 MGAMO43451 1857 aa15.99■□□□□ 0.15
SIRPB3P-201ENST00000340424 BAZ2AQ9UIF9 1905 aaKnown RBP15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 CHGBP05060 677 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 CTGFP29279 349 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 CTR9Q6PD62 1173 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 ANKRD13CQ8N6S4 541 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 RAET1EQ8TD07 263 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 OTUD7AQ8TE49 926 aaPredicted RBP15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 OSBP2Q969R2 916 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 EVI5LQ96CN4 794 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 SH2D4AQ9H788 454 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 EMILIN3Q9NT22 766 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 MORF4L1Q9UBU8 362 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 ZSWIM8A7E2V4 1837 aa15.98■□□□□ 0.15
SIRPB3P-201ENST00000340424 MPHOSPH10O00566 681 aaKnown RBP15.97■□□□□ 0.15
SIRPB3P-201ENST00000340424 TNPO2O14787 897 aaKnown RBP15.97■□□□□ 0.15
SIRPB3P-201ENST00000340424 GPAA1O43292 621 aa15.97■□□□□ 0.15
SIRPB3P-201ENST00000340424 CYP2D6P10635 497 aa15.97■□□□□ 0.15
SIRPB3P-201ENST00000340424 PDE1AP54750 535 aa15.97■□□□□ 0.15
SIRPB3P-201ENST00000340424 EXOC6Q8TAG9 804 aa15.97■□□□□ 0.15
SIRPB3P-201ENST00000340424 COA7Q96BR5 231 aa15.97■□□□□ 0.15
SIRPB3P-201ENST00000340424 ZNF287Q9HBT7 754 aa15.97■□□□□ 0.15
SIRPB3P-201ENST00000340424 ROBO3Q96MS0 1386 aa15.97■□□□□ 0.15
SIRPB3P-201ENST00000340424 GSG1L2A8MUP6 293 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L15C9J2P7 530 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L13C9JLJ4 530 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L11C9JVI0 530 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L18D6R9N7 530 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L22D6RA61 530 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L17D6RBQ6 530 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L19D6RCP7 530 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L20D6RJB6 530 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 GUCY1A2P33402 732 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 CDK8P49336 464 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 HERVK_113P62684 666 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 USP17L24Q0WX57 530 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 SEPT2Q15019 361 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 SLAIN1Q8ND83 568 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 DYNLL2Q96FJ2 89 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 TMEM106CQ9BVX2 250 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 NACAP1Q9BZK3 213 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 ARHGEF10LQ9HCE6 1279 aa15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 SUPT16HQ9Y5B9 1047 aaKnown RBP15.96■□□□□ 0.15
SIRPB3P-201ENST00000340424 VCAM1P19320 739 aa15.95■□□□□ 0.14
SIRPB3P-201ENST00000340424 PRKCZQ05513 592 aa15.95■□□□□ 0.14
SIRPB3P-201ENST00000340424 IRF5Q13568 498 aa15.95■□□□□ 0.14
SIRPB3P-201ENST00000340424 ZMYM1Q5SVZ6 1142 aa15.95■□□□□ 0.14
SIRPB3P-201ENST00000340424 SLC44A5Q8NCS7 719 aa15.95■□□□□ 0.14
SIRPB3P-201ENST00000340424 LPAR1Q92633 364 aa15.95■□□□□ 0.14
SIRPB3P-201ENST00000340424 PATL2C9JE40 543 aaKnown RBP15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 M0R2C6 588 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 APPP05067 770 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 GRK4P32298 578 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 TDO2P48775 406 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 NUCB1Q02818 461 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 EVX2Q03828 476 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 ICA1Q05084 483 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 ZYXQ15942 572 aaKnown RBP15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 LBX2Q6XYB7 198 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 CHD1LQ86WJ1 897 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 GPRC5AQ8NFJ5 357 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 ACER1Q8TDN7 264 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 PXYLP1Q8TE99 480 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 P2RX7Q99572 595 aaKnown RBP15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 LNPKQ9C0E8 428 aa15.94■□□□□ 0.14
SIRPB3P-201ENST00000340424 TNRC18O15417 2968 aaPredicted RBP15.93■□□□□ 0.14
SIRPB3P-201ENST00000340424 CYP2D7A0A087X1C5 515 aa15.93■□□□□ 0.14
SIRPB3P-201ENST00000340424 AKR1B1P15121 316 aa15.93■□□□□ 0.14
SIRPB3P-201ENST00000340424 FLT3LGP49771 235 aa15.93■□□□□ 0.14
SIRPB3P-201ENST00000340424 UBXN2AP68543 259 aa15.93■□□□□ 0.14
SIRPB3P-201ENST00000340424 CATSPERGQ6ZRH7 1159 aa15.93■□□□□ 0.14
SIRPB3P-201ENST00000340424 KANSL2Q9H9L4 492 aa15.93■□□□□ 0.14
SIRPB3P-201ENST00000340424 RABGAP1Q9Y3P9 1069 aa15.93■□□□□ 0.14
SIRPB3P-201ENST00000340424 ECM2O94769 699 aaPredicted RBP15.92■□□□□ 0.14
SIRPB3P-201ENST00000340424 SLC3A2P08195 630 aaKnown RBP15.92■□□□□ 0.14
SIRPB3P-201ENST00000340424 MAPK4P31152 587 aa15.92■□□□□ 0.14
SIRPB3P-201ENST00000340424 ERVK-9P63128 1117 aa15.92■□□□□ 0.14
SIRPB3P-201ENST00000340424 ERVK-24P63145 666 aa15.92■□□□□ 0.14
SIRPB3P-201ENST00000340424 CCNA1P78396 465 aa15.92■□□□□ 0.14
SIRPB3P-201ENST00000340424 IFNL3Q8IZI9 196 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms