RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TREML2Q5T2D2 321 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 PROCA1Q8NCQ7 364 aaPredicted RBP18.15■□□□□ 0.5
UBE3B-201ENST00000340074 ZFYVE28Q9HCC9 887 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 ZMYM6O95789 1325 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 C19orf81C9J6K1 198 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 GPR25O00155 361 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 PDE4BQ07343 736 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 COL13A1Q5TAT6 717 aaPredicted RBP18.15■□□□□ 0.5
UBE3B-201ENST00000340074 CLEC10AQ8IUN9 316 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 ACER1Q8TDN7 264 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 RUFY2Q8WXA3 655 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 FEZ1Q99689 392 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 ZNF287Q9HBT7 754 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 ANAPC4Q9UJX5 808 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 AGTPBP1Q9UPW5 1226 aa18.15■□□□□ 0.5
UBE3B-201ENST00000340074 RAD50Q92878 1312 aa18.14■□□□□ 0.49
UBE3B-201ENST00000340074 ZYXQ15942 572 aaKnown RBP18.14■□□□□ 0.49
UBE3B-201ENST00000340074 NOM1Q5C9Z4 860 aaKnown RBP18.14■□□□□ 0.49
UBE3B-201ENST00000340074 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.49
UBE3B-201ENST00000340074 ZNF296Q8WUU4 475 aaPredicted RBP18.14■□□□□ 0.49
UBE3B-201ENST00000340074 INCENPQ9NQS7 918 aa18.14■□□□□ 0.49
UBE3B-201ENST00000340074 TMOD4Q9NZQ9 345 aa18.14■□□□□ 0.49
UBE3B-201ENST00000340074 MGAMO43451 1857 aa18.13■□□□□ 0.49
UBE3B-201ENST00000340074 CYP2C8P10632 490 aa18.13■□□□□ 0.49
UBE3B-201ENST00000340074 HAND2P61296 217 aa18.13■□□□□ 0.49
UBE3B-201ENST00000340074 ICA1Q05084 483 aa18.13■□□□□ 0.49
UBE3B-201ENST00000340074 USP17L2Q6R6M4 530 aa18.13■□□□□ 0.49
UBE3B-201ENST00000340074 DSCC1Q9BVC3 393 aa18.13■□□□□ 0.49
UBE3B-201ENST00000340074 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.13■□□□□ 0.49
UBE3B-201ENST00000340074 KIAA1683Q9H0B3 1180 aa18.13■□□□□ 0.49
UBE3B-201ENST00000340074 EMILIN3Q9NT22 766 aa18.13■□□□□ 0.49
UBE3B-201ENST00000340074 SLC45A1Q9Y2W3 748 aa18.13■□□□□ 0.49
UBE3B-201ENST00000340074 TACC3Q9Y6A5 838 aa18.13■□□□□ 0.49
UBE3B-201ENST00000340074 ZSWIM8A7E2V4 1837 aa18.12■□□□□ 0.49
UBE3B-201ENST00000340074 A0A1W2PRG0 241 aa18.12■□□□□ 0.49
UBE3B-201ENST00000340074 TLR2O60603 784 aa18.12■□□□□ 0.49
UBE3B-201ENST00000340074 SIAH1Q8IUQ4 282 aa18.12■□□□□ 0.49
UBE3B-201ENST00000340074 PARK7Q99497 189 aaKnown RBP18.12■□□□□ 0.49
UBE3B-201ENST00000340074 SGSM2O43147 1006 aa18.11■□□□□ 0.49
UBE3B-201ENST00000340074 FKTNO75072 461 aa18.11■□□□□ 0.49
UBE3B-201ENST00000340074 USP14P54578 494 aa18.11■□□□□ 0.49
UBE3B-201ENST00000340074 KANSL2Q9H9L4 492 aa18.11■□□□□ 0.49
UBE3B-201ENST00000340074 ARHGEF10LQ9HCE6 1279 aa18.11■□□□□ 0.49
UBE3B-201ENST00000340074 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.11■□□□□ 0.49
UBE3B-201ENST00000340074 PARP14Q460N5 1801 aa18.11■□□□□ 0.49
UBE3B-201ENST00000340074 EEF2P13639 858 aaKnown RBP18.1■□□□□ 0.49
UBE3B-201ENST00000340074 ATP2B2Q01814 1243 aa18.1■□□□□ 0.49
UBE3B-201ENST00000340074 FAM47AQ5JRC9 791 aa18.1■□□□□ 0.49
UBE3B-201ENST00000340074 C12orf42Q96LP6 360 aa18.1■□□□□ 0.49
UBE3B-201ENST00000340074 NBPF3Q9H094 633 aa18.1■□□□□ 0.49
UBE3B-201ENST00000340074 ADGRA2Q96PE1 1338 aa18.1■□□□□ 0.49
UBE3B-201ENST00000340074 RLFQ13129 1914 aa18.09■□□□□ 0.49
UBE3B-201ENST00000340074 ZNF213O14771 459 aa18.09■□□□□ 0.49
UBE3B-201ENST00000340074 FGRP09769 529 aa18.09■□□□□ 0.49
UBE3B-201ENST00000340074 TSPY3P0CV98 308 aa18.09■□□□□ 0.49
UBE3B-201ENST00000340074 TSPY8P0CW00 308 aa18.09■□□□□ 0.49
UBE3B-201ENST00000340074 TFAP4Q01664 338 aa18.09■□□□□ 0.49
UBE3B-201ENST00000340074 PTH1RQ03431 593 aa18.09■□□□□ 0.49
UBE3B-201ENST00000340074 PABPC4Q13310 644 aaKnown RBP eCLIP18.09■□□□□ 0.49
UBE3B-201ENST00000340074 ASCC2Q9H1I8 757 aaPredicted RBP18.09■□□□□ 0.49
UBE3B-201ENST00000340074 CPA4Q9UI42 421 aa18.09■□□□□ 0.49
UBE3B-201ENST00000340074 PNMA3Q9UL41 463 aa18.09■□□□□ 0.49
UBE3B-201ENST00000340074 TMX2Q9Y320 296 aa18.09■□□□□ 0.49
UBE3B-201ENST00000340074 IGKV6D-41A0A0C4DH26 115 aa18.08■□□□□ 0.49
UBE3B-201ENST00000340074 RANBP6O60518 1105 aaKnown RBP18.08■□□□□ 0.49
UBE3B-201ENST00000340074 OSBPP22059 807 aa18.08■□□□□ 0.49
UBE3B-201ENST00000340074 HOXA7P31268 230 aaPredicted RBP18.08■□□□□ 0.49
UBE3B-201ENST00000340074 SP3Q02447 781 aa18.08■□□□□ 0.49
UBE3B-201ENST00000340074 RRP12Q5JTH9 1297 aaKnown RBP18.08■□□□□ 0.49
UBE3B-201ENST00000340074 C17orf99Q6UX52 265 aa18.08■□□□□ 0.49
UBE3B-201ENST00000340074 TBC1D10CQ8IV04 446 aa18.08■□□□□ 0.49
UBE3B-201ENST00000340074 NEDD1Q8NHV4 660 aa18.08■□□□□ 0.49
UBE3B-201ENST00000340074 SMCR8Q8TEV9 937 aaPredicted RBP18.08■□□□□ 0.49
UBE3B-201ENST00000340074 SH2D4AQ9H788 454 aa18.08■□□□□ 0.49
UBE3B-201ENST00000340074 TOMM22Q9NS69 142 aa18.08■□□□□ 0.49
UBE3B-201ENST00000340074 CTNNA3Q9UI47 895 aa18.08■□□□□ 0.49
UBE3B-201ENST00000340074 PLIN4Q96Q06 1357 aa18.08■□□□□ 0.48
UBE3B-201ENST00000340074 TSPY2A6NKD2 308 aa18.07■□□□□ 0.48
UBE3B-201ENST00000340074 ORC4O43929 436 aa18.07■□□□□ 0.48
UBE3B-201ENST00000340074 VCAM1P19320 739 aa18.07■□□□□ 0.48
UBE3B-201ENST00000340074 IMMTQ16891 758 aaKnown RBP18.07■□□□□ 0.48
UBE3B-201ENST00000340074 KIAA1755Q5JYT7 1200 aa18.07■□□□□ 0.48
UBE3B-201ENST00000340074 AKNAD1Q5T1N1 836 aa18.07■□□□□ 0.48
UBE3B-201ENST00000340074 MFSD6Q6ZSS7 791 aa18.07■□□□□ 0.48
UBE3B-201ENST00000340074 CEP95Q96GE4 821 aa18.07■□□□□ 0.48
UBE3B-201ENST00000340074 ESYT1Q9BSJ8 1104 aa18.07■□□□□ 0.48
UBE3B-201ENST00000340074 CENPFP49454 3210 aa18.07■□□□□ 0.48
UBE3B-201ENST00000340074 DOCK3Q8IZD9 2030 aa18.07■□□□□ 0.48
UBE3B-201ENST00000340074 IRX3P78415 501 aaPredicted RBP18.06■□□□□ 0.48
UBE3B-201ENST00000340074 CD99L2Q8TCZ2 262 aa18.06■□□□□ 0.48
UBE3B-201ENST00000340074 STAG1Q8WVM7 1258 aa18.06■□□□□ 0.48
UBE3B-201ENST00000340074 MTMR4Q9NYA4 1195 aa18.06■□□□□ 0.48
UBE3B-201ENST00000340074 NYAP2Q9P242 653 aa18.06■□□□□ 0.48
UBE3B-201ENST00000340074 COL11A1P12107 1806 aaPredicted RBP18.06■□□□□ 0.48
UBE3B-201ENST00000340074 CDC45O75419 566 aa18.06■□□□□ 0.48
UBE3B-201ENST00000340074 BCRP11274 1271 aa18.06■□□□□ 0.48
UBE3B-201ENST00000340074 PCP11498 1178 aaKnown RBP18.06■□□□□ 0.48
UBE3B-201ENST00000340074 CAP1Q01518 475 aa18.06■□□□□ 0.48
UBE3B-201ENST00000340074 SPICE1Q8N0Z3 855 aa18.06■□□□□ 0.48
UBE3B-201ENST00000340074 ERO1AQ96HE7 468 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms