RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 PICK1Q9NRD5 415 aa17.32■□□□□ 0.36
CSRP1-201ENST00000340006 CLIP2Q9UDT6 1046 aa17.32■□□□□ 0.36
CSRP1-201ENST00000340006 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
CSRP1-201ENST00000340006 CELF2O95319 508 aaKnown RBP17.31■□□□□ 0.36
CSRP1-201ENST00000340006 ITGBL1O95965 494 aaPredicted RBP17.31■□□□□ 0.36
CSRP1-201ENST00000340006 JAG1P78504 1218 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 MOB2Q70IA6 237 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 ENAHQ8N8S7 591 aaPredicted RBP17.31■□□□□ 0.36
CSRP1-201ENST00000340006 SMC1BQ8NDV3 1235 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 SNX21Q969T3 373 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 MTA3Q9BTC8 594 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 ALDH8A1Q9H2A2 487 aaPredicted RBP17.31■□□□□ 0.36
CSRP1-201ENST00000340006 TOMM70O94826 608 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 APOBRQ0VD83 1088 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 SYNE3Q6ZMZ3 975 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 DGKHQ86XP1 1220 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 HSCBQ8IWL3 235 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 C2orf69Q8N8R5 385 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 ANP32EQ9BTT0 268 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.31■□□□□ 0.36
CSRP1-201ENST00000340006 MTMR4Q9NYA4 1195 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 ZBTB21Q9ULJ3 1066 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 CSADQ9Y600 493 aa17.31■□□□□ 0.36
CSRP1-201ENST00000340006 SH2B2O14492 632 aaPredicted RBP17.3■□□□□ 0.36
CSRP1-201ENST00000340006 CD2BP2O95400 341 aaKnown RBP17.3■□□□□ 0.36
CSRP1-201ENST00000340006 TTLL1O95922 423 aa17.3■□□□□ 0.36
CSRP1-201ENST00000340006 TOB2Q14106 344 aaPredicted RBP17.3■□□□□ 0.36
CSRP1-201ENST00000340006 PPP4R3BQ5MIZ7 849 aa17.3■□□□□ 0.36
CSRP1-201ENST00000340006 KAT14Q9H8E8 782 aa17.3■□□□□ 0.36
CSRP1-201ENST00000340006 LY9Q9HBG7 655 aa17.3■□□□□ 0.36
CSRP1-201ENST00000340006 UBE2Q2LH0YL09 131 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 RAD21O60216 631 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 LIFRP42702 1097 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 MCM2P49736 904 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 CLEC10AQ8IUN9 316 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 SENP2Q9HC62 589 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.29■□□□□ 0.36
CSRP1-201ENST00000340006 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 SSC5DA1L4H1 1573 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 EEF2P13639 858 aaKnown RBP17.29■□□□□ 0.36
CSRP1-201ENST00000340006 ICA1Q05084 483 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 SEC23AQ15436 765 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 ANKRD13AQ8IZ07 590 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 SCYL3Q8IZE3 742 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.29■□□□□ 0.36
CSRP1-201ENST00000340006 CHMP4CQ96CF2 233 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 GBA2Q9HCG7 927 aaPredicted RBP17.29■□□□□ 0.36
CSRP1-201ENST00000340006 MTMR7Q9Y216 660 aa17.29■□□□□ 0.36
CSRP1-201ENST00000340006 ATAD5Q96QE3 1844 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 KLF18A0A0U1RQI7 1052 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 USP17L5A8MUK1 530 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 GUCY1A2P33402 732 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 CATIPQ7Z7H3 387 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 FBXL16Q8N461 479 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 TMEM47Q9BQJ4 181 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 ARHGEF10LQ9HCE6 1279 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 GINM1Q9NU53 330 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 IGKV6D-41A0A0C4DH26 115 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 TOP1P11387 765 aaKnown RBP17.28■□□□□ 0.36
CSRP1-201ENST00000340006 STK3Q13188 491 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 VGLL4Q14135 290 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 RCSD1Q6JBY9 416 aa17.28■□□□□ 0.36
CSRP1-201ENST00000340006 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.28■□□□□ 0.36
CSRP1-201ENST00000340006 RBM46Q8TBY0 533 aaKnown RBP17.28■□□□□ 0.36
CSRP1-201ENST00000340006 MYH4Q9Y623 1939 aa17.27■□□□□ 0.36
CSRP1-201ENST00000340006 CST9Q5W186 159 aa17.27■□□□□ 0.36
CSRP1-201ENST00000340006 CCDC84Q86UT8 332 aaPredicted RBP17.27■□□□□ 0.36
CSRP1-201ENST00000340006 NUP133Q8WUM0 1156 aa17.27■□□□□ 0.36
CSRP1-201ENST00000340006 ANKS1AQ92625 1134 aa17.27■□□□□ 0.36
CSRP1-201ENST00000340006 AGXT2Q9BYV1 514 aa17.27■□□□□ 0.36
CSRP1-201ENST00000340006 NYAP2Q9P242 653 aa17.27■□□□□ 0.36
CSRP1-201ENST00000340006 BRPF3Q9ULD4 1205 aa17.27■□□□□ 0.36
CSRP1-201ENST00000340006 TPCN1Q9ULQ1 816 aa17.27■□□□□ 0.36
CSRP1-201ENST00000340006 ZHX2Q9Y6X8 837 aa17.27■□□□□ 0.36
CSRP1-201ENST00000340006 PLIN4Q96Q06 1357 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 PTPRAP18433 802 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 FKBP1BP68106 108 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 MAP3K11Q16584 847 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 SGMS1Q86VZ5 419 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 RAB11FIP4Q86YS3 637 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 PNMA1Q8ND90 353 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 SLC10A4Q96EP9 437 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 ZSCAN31Q96LW9 406 aaPredicted RBP17.26■□□□□ 0.35
CSRP1-201ENST00000340006 TRPM7Q96QT4 1865 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 SIAH1Q8IUQ4 282 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 LRRC47Q8N1G4 583 aaKnown RBP17.26■□□□□ 0.35
CSRP1-201ENST00000340006 ZNF274Q96GC6 653 aaPredicted RBP17.26■□□□□ 0.35
CSRP1-201ENST00000340006 MYL10Q9BUA6 226 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 SLKQ9H2G2 1235 aaPredicted RBP17.26■□□□□ 0.35
CSRP1-201ENST00000340006 ELP3Q9H9T3 547 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 AS3MTQ9HBK9 375 aa17.26■□□□□ 0.35
CSRP1-201ENST00000340006 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
CSRP1-201ENST00000340006 ZBTB43O43298 467 aa17.25■□□□□ 0.35
CSRP1-201ENST00000340006 CCDC144CPQ8IYA2 1237 aa17.25■□□□□ 0.35
CSRP1-201ENST00000340006 ZNF654Q8IZM8 581 aa17.25■□□□□ 0.35
CSRP1-201ENST00000340006 MKL1Q969V6 931 aa17.25■□□□□ 0.35
CSRP1-201ENST00000340006 CLMNQ96JQ2 1002 aa17.25■□□□□ 0.35
CSRP1-201ENST00000340006 FEZ1Q99689 392 aa17.25■□□□□ 0.35
CSRP1-201ENST00000340006 DOCK1Q14185 1865 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms