RNA–Protein interactions for RNA: ENST00000339530.8

LST1-203, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-203ENST00000339530 GNAQP50148 359 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 RBM5P52756 815 aaKnown RBP eCLIP12.88□□□□□ -0.35
LST1-203ENST00000339530 TROAPQ12815 778 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 TRIM29Q14134 588 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 TNIP1Q15025 636 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 FAM47AQ5JRC9 791 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 FKBP1CQ5VVH2 108 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 CIAPIN1Q6FI81 312 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 BRAPQ7Z569 592 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 FBXO18Q8NFZ0 1043 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 NUP133Q8WUM0 1156 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 CCDC17Q96LX7 622 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 SCAND2PQ9GZW5 306 aaPredicted RBP12.88□□□□□ -0.35
LST1-203ENST00000339530 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
LST1-203ENST00000339530 SBF1O95248 1867 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 VEGFAP15692 232 aaPredicted RBP12.87□□□□□ -0.35
LST1-203ENST00000339530 RXRAP19793 462 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 LMNB1P20700 586 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 EVX2Q03828 476 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 RCSD1Q6JBY9 416 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 TMTC3Q6ZXV5 915 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 RAB11FIP4Q86YS3 637 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 ZNF396Q96N95 335 aaPredicted RBP12.87□□□□□ -0.35
LST1-203ENST00000339530 ALG1Q9BT22 464 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 CFAP45Q9UL16 551 aa12.87□□□□□ -0.35
LST1-203ENST00000339530 DDX49Q9Y6V7 483 aaKnown RBP12.87□□□□□ -0.35
LST1-203ENST00000339530 GLTPD2A6NH11 291 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 PRPF40AO75400 957 aaKnown RBP12.86□□□□□ -0.35
LST1-203ENST00000339530 RAD17O75943 681 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 TOP1P11387 765 aaKnown RBP12.86□□□□□ -0.35
LST1-203ENST00000339530 XBP1P17861 261 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 AKAP17AQ02040 695 aaKnown RBP12.86□□□□□ -0.35
LST1-203ENST00000339530 GRM4Q14833 912 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 NBPF11Q86T75 865 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 CCDC144CPQ8IYA2 1237 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 FAM177A1Q8N128 213 aaPredicted RBP12.86□□□□□ -0.35
LST1-203ENST00000339530 CRACR2BQ8N4Y2 399 aaPredicted RBP12.86□□□□□ -0.35
LST1-203ENST00000339530 SLC44A5Q8NCS7 719 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 PNMA1Q8ND90 353 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 LZTS2Q9BRK4 669 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 SLC26A6Q9BXS9 759 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 IL17RBQ9NRM6 502 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 PI4KBQ9UBF8 816 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
LST1-203ENST00000339530 IGKV6D-41A0A0C4DH26 115 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 PRPF3O43395 683 aaKnown RBP12.85□□□□□ -0.35
LST1-203ENST00000339530 UBE2HP62256 183 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 DNM1Q05193 864 aaKnown RBP12.85□□□□□ -0.35
LST1-203ENST00000339530 CXCL9Q07325 125 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 NFIAQ12857 509 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 DLGAP5Q15398 846 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 SLC4A8Q2Y0W8 1093 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 FERMT3Q86UX7 667 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 METTL16Q86W50 562 aaKnown RBP12.85□□□□□ -0.35
LST1-203ENST00000339530 FOXP4Q8IVH2 680 aaPredicted RBP12.85□□□□□ -0.35
LST1-203ENST00000339530 PHKBQ93100 1093 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 SYAP1Q96A49 352 aaPredicted RBP12.85□□□□□ -0.35
LST1-203ENST00000339530 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 FAM198AQ9UFP1 575 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 ISY1Q9ULR0 285 aaKnown RBP12.85□□□□□ -0.35
LST1-203ENST00000339530 CNPY2Q9Y2B0 182 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 PCNTO95613 3336 aa12.85□□□□□ -0.35
LST1-203ENST00000339530 FIBPO43427 364 aa12.84□□□□□ -0.35
LST1-203ENST00000339530 MYO1BO43795 1136 aa12.84□□□□□ -0.35
LST1-203ENST00000339530 NMT2O60551 498 aa12.84□□□□□ -0.35
LST1-203ENST00000339530 SHMT1P34896 483 aa12.84□□□□□ -0.35
LST1-203ENST00000339530 FUT2Q10981 343 aa12.84□□□□□ -0.35
LST1-203ENST00000339530 GSE1Q14687 1217 aa12.84□□□□□ -0.35
LST1-203ENST00000339530 SAFBQ15424 915 aaKnown RBP eCLIP12.84□□□□□ -0.35
LST1-203ENST00000339530 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
LST1-203ENST00000339530 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
LST1-203ENST00000339530 USP48Q86UV5 1035 aa12.84□□□□□ -0.35
LST1-203ENST00000339530 ATAD5Q96QE3 1844 aa12.83□□□□□ -0.35
LST1-203ENST00000339530 SMARCA1P28370 1054 aa12.83□□□□□ -0.36
LST1-203ENST00000339530 EIF6P56537 245 aaKnown RBP12.83□□□□□ -0.36
LST1-203ENST00000339530 ZNF280AP59817 542 aaPredicted RBP12.83□□□□□ -0.36
LST1-203ENST00000339530 KIF23Q02241 960 aaPredicted RBP12.83□□□□□ -0.36
LST1-203ENST00000339530 KRT40Q6A162 431 aa12.83□□□□□ -0.36
LST1-203ENST00000339530 FAM83AQ86UY5 434 aa12.83□□□□□ -0.36
LST1-203ENST00000339530 FAM151AQ8WW52 585 aa12.83□□□□□ -0.36
LST1-203ENST00000339530 ZBED3Q96IU2 234 aaPredicted RBP12.83□□□□□ -0.36
LST1-203ENST00000339530 PRMT6Q96LA8 375 aaPredicted RBP12.83□□□□□ -0.36
LST1-203ENST00000339530 TMEM47Q9BQJ4 181 aa12.83□□□□□ -0.36
LST1-203ENST00000339530 TDRD3Q9H7E2 651 aaKnown RBP12.83□□□□□ -0.36
LST1-203ENST00000339530 HERC5Q9UII4 1024 aaKnown RBP12.83□□□□□ -0.36
LST1-203ENST00000339530 STX8Q9UNK0 236 aa12.83□□□□□ -0.36
LST1-203ENST00000339530 FZD9O00144 591 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 DTNBO60941 627 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 TTLL1O95922 423 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 MMP1P03956 469 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
LST1-203ENST00000339530 HTRA3P83110 453 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 RASSF7Q02833 373 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 COL13A1Q5TAT6 717 aaPredicted RBP12.82□□□□□ -0.36
LST1-203ENST00000339530 TATDN1Q6P1N9 297 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 DPF2Q92785 391 aa12.82□□□□□ -0.36
LST1-203ENST00000339530 CEP95Q96GE4 821 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms