RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 EIF4BP23588 611 aaKnown RBP10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 ALDH1B1P30837 517 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 MATR3P43243 847 aaKnown RBP eCLIP10.82□□□□□ -0.684e-7■■■□□ 19.1
PTCHD4-201ENST00000339488 CUL3Q13618 768 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 BLMHQ13867 455 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 TOB2Q14106 344 aaPredicted RBP10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 WHAMMP3Q1A5X7 153 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 OTUD7BQ6GQQ9 843 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 CHADLQ6NUI6 762 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 C6orf89Q6UWU4 347 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 MAGEC3Q8TD91 643 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 PREBQ9HCU5 417 aa10.82□□□□□ -0.68
PTCHD4-201ENST00000339488 NPHP4O75161 1426 aaPredicted RBP10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 N4BP3O15049 544 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 CDC27P30260 824 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 CA8P35219 290 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 CD151P48509 253 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 MYL5Q02045 173 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 PDE4BQ07343 736 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 ZRSR2Q15696 482 aaKnown RBP10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 SLC5A4Q9NY91 659 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 RCOR1Q9UKL0 485 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 THRAP3Q9Y2W1 955 aaKnown RBP10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 RBM8AQ9Y5S9 174 aaKnown RBP10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 GOLGA8KD6RF30 607 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 TBX2Q13207 712 aaPredicted RBP10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 PNOCQ13519 176 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 POLA2Q14181 598 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 MTHFD1LQ6UB35 978 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 CCNI2Q6ZMN8 369 aaPredicted RBP10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 G2E3Q7L622 706 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 CAGE1Q8TC20 777 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 HVCN1Q96D96 273 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 LZTS2Q9BRK4 669 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 GUCA1BQ9UMX6 200 aa10.81□□□□□ -0.68
PTCHD4-201ENST00000339488 ATP1A1P05023 1023 aaKnown RBP10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 SKOR1P84550 965 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 PPARAQ07869 468 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 ENOX2Q16206 610 aaKnown RBP10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 ZNF827Q17R98 1081 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 SFMBT2Q5VUG0 894 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 CREB3L3Q68CJ9 461 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 DDX46Q7L014 1031 aaKnown RBP10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 TMEM110Q86TL2 294 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 ERICH1Q86X53 443 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 SPATS2Q86XZ4 545 aaKnown RBP10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 GALNT15Q8N3T1 639 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 ZIM3Q96PE6 472 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 ABCC3O15438 1527 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 TET3O43151 1660 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 A6NHS1 94 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 TEX33O43247 280 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 AMPD2Q01433 879 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 SAFB2Q14151 953 aaKnown RBP eCLIP10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 RNF220Q5VTB9 566 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 CCDC102BQ68D86 513 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 SPECC1LQ69YQ0 1117 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 TSPAN18Q96SJ8 248 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 ACTR5Q9H9F9 607 aaPredicted RBP10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 SMARCAL1Q9NZC9 954 aa10.8□□□□□ -0.68
PTCHD4-201ENST00000339488 PDE2AO00408 941 aaPredicted RBP10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 PI4K2BQ8TCG2 481 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 AIDAQ96BJ3 306 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 PUS7Q96PZ0 661 aaKnown RBP10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 BPIFA3Q9BQP9 254 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 ABCF2Q9UG63 623 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 LEMD3Q9Y2U8 911 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 AGLP35573 1532 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 ZNF24P17028 368 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 TMOD1P28289 359 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 AMPHP49418 695 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 MIGA2Q7L4E1 593 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 ILDR1Q86SU0 546 aaPredicted RBP10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 PALB2Q86YC2 1186 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 CNBD1Q8NA66 436 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 SLF1Q9BQI6 1058 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 DMGDHQ9UI17 866 aaKnown RBP10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 CLIC4Q9Y696 253 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 POLR3DP05423 398 aaPredicted RBP10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 NR1D1P20393 614 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 RBL2Q08999 1139 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 XRCC4Q13426 336 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 BYSLQ13895 437 aaKnown RBP10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 RASA3Q14644 834 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 BLOC1S2Q6QNY1 142 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 FAM227BQ96M60 508 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 PHAXQ9H814 394 aaKnown RBP10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 GALNT8Q9NY28 637 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 GGT7Q9UJ14 662 aa10.79□□□□□ -0.68
PTCHD4-201ENST00000339488 TUBGCP6Q96RT7 1819 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 SMAPO00193 183 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 OPA1O60313 960 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 FAM107AO95990 144 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 ZKSCAN1P17029 563 aaPredicted RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 INHBCP55103 352 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 PTF1AQ7RTS3 328 aa10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 AENQ8WTP8 325 aaKnown RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 NOC3LQ8WTT2 800 aaKnown RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 L3MBTL3Q96JM7 780 aaPredicted RBP10.78□□□□□ -0.68
PTCHD4-201ENST00000339488 NOP53Q9NZM5 478 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms