RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PPP2R5BQ15173 497 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 MIGA2Q7L4E1 593 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 ZNF654Q8IZM8 581 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 GTF3C6Q969F1 213 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 CEP95Q96GE4 821 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 ZNF341Q9BYN7 854 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 BRPF3Q9ULD4 1205 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 STX8Q9UNK0 236 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 TTLL1O95922 423 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 ASNSP08243 561 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 TOP1P11387 765 aaKnown RBP17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 LARP6Q9BRS8 491 aaKnown RBP17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 KAT14Q9H8E8 782 aa17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.01■□□□□ 0.31
NIPAL3-202ENST00000339255 SSC5DA1L4H1 1573 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 PAPPA2Q9BXP8 1791 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 PHF20L1A8MW92 1017 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 CTNND1O60716 968 aaKnown RBP17■□□□□ 0.31
NIPAL3-202ENST00000339255 LARGE1O95461 756 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 NF2P35240 595 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 CAP2P40123 477 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 LDHDQ86WU2 507 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 MICU3Q86XE3 530 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 RRAGCQ9HB90 399 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 SENP2Q9HC62 589 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 SYNPO2Q9UMS6 1093 aa17■□□□□ 0.31
NIPAL3-202ENST00000339255 CCDC196A0A1B0GTZ2 297 aa16.99■□□□□ 0.31
NIPAL3-202ENST00000339255 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
NIPAL3-202ENST00000339255 GH2P01242 217 aa16.99■□□□□ 0.31
NIPAL3-202ENST00000339255 METAP2P50579 478 aaKnown RBP eCLIP16.99■□□□□ 0.31
NIPAL3-202ENST00000339255 PNMA1Q8ND90 353 aa16.99■□□□□ 0.31
NIPAL3-202ENST00000339255 MAP3K14Q99558 947 aa16.99■□□□□ 0.31
NIPAL3-202ENST00000339255 NYAP2Q9P242 653 aa16.99■□□□□ 0.31
NIPAL3-202ENST00000339255 ZBTB21Q9ULJ3 1066 aa16.99■□□□□ 0.31
NIPAL3-202ENST00000339255 HPS5Q9UPZ3 1129 aa16.99■□□□□ 0.31
NIPAL3-202ENST00000339255 OTOFQ9HC10 1997 aa16.98■□□□□ 0.31
NIPAL3-202ENST00000339255 GDF11O95390 407 aa16.98■□□□□ 0.31
NIPAL3-202ENST00000339255 SLURP2P0DP57 97 aa16.98■□□□□ 0.31
NIPAL3-202ENST00000339255 ICA1Q05084 483 aa16.98■□□□□ 0.31
NIPAL3-202ENST00000339255 STK3Q13188 491 aa16.98■□□□□ 0.31
NIPAL3-202ENST00000339255 LLPHQ9BRT6 129 aaKnown RBP16.98■□□□□ 0.31
NIPAL3-202ENST00000339255 ZNF112Q9UJU3 913 aa16.98■□□□□ 0.31
NIPAL3-202ENST00000339255 CLEC11AQ9Y240 323 aa16.98■□□□□ 0.31
NIPAL3-202ENST00000339255 MYH6P13533 1939 aa16.98■□□□□ 0.31
NIPAL3-202ENST00000339255 GOLGA8AA7E2F4 631 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 PPP1R12BO60237 982 aaPredicted RBP16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 TROAPQ12815 778 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 CPLX2Q6PUV4 134 aaKnown RBP16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 USP48Q86UV5 1035 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 CCDC83Q8IWF9 413 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 TMEM47Q9BQJ4 181 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 CDKL5O76039 1030 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 KIF5BP33176 963 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 SLC4A3P48751 1232 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 SCRN1Q12765 414 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 SEPT2Q15019 361 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 RAB3GAP1Q15042 981 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 NECAB1Q8N987 351 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 MKL1Q969V6 931 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 CDCA5Q96FF9 252 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 WRNIP1Q96S55 665 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 SH2D4AQ9H788 454 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 NMRK2Q9NPI5 230 aa16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 RBM28Q9NW13 759 aaKnown RBP16.97■□□□□ 0.31
NIPAL3-202ENST00000339255 CPLX1O14810 134 aa16.96■□□□□ 0.31
NIPAL3-202ENST00000339255 RRP1BQ14684 758 aaKnown RBP16.96■□□□□ 0.31
NIPAL3-202ENST00000339255 RTN1Q16799 776 aa16.96■□□□□ 0.31
NIPAL3-202ENST00000339255 PRAMEF18Q5VWM3 479 aa16.96■□□□□ 0.31
NIPAL3-202ENST00000339255 FANCBQ8NB91 859 aa16.96■□□□□ 0.31
NIPAL3-202ENST00000339255 CTCFLQ8NI51 663 aaPredicted RBP16.96■□□□□ 0.31
NIPAL3-202ENST00000339255 ARHGEF10LQ9HCE6 1279 aa16.96■□□□□ 0.31
NIPAL3-202ENST00000339255 GUCY1A2P33402 732 aa16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 IREB2P48200 963 aaKnown RBP16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 CCT2P78371 535 aaKnown RBP16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 NUP133Q8WUM0 1156 aa16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 KLRG1Q96E93 195 aa16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 MYL10Q9BUA6 226 aa16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 GLIS2Q9BZE0 524 aaPredicted RBP16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 CLIP2Q9UDT6 1046 aa16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 KIF3AQ9Y496 699 aa16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 PHIPQ8WWQ0 1821 aa16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 TRPM7Q96QT4 1865 aa16.95■□□□□ 0.3
NIPAL3-202ENST00000339255 EEF2P13639 858 aaKnown RBP16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 HMGN5P82970 282 aaKnown RBP16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 ST3GAL1Q11201 340 aa16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 NOL9Q5SY16 702 aaKnown RBP16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 SCYL3Q8IZE3 742 aa16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 ZNF526Q8TF50 670 aaPredicted RBP16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 NCOA5Q9HCD5 579 aaKnown RBP16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 PICK1Q9NRD5 415 aa16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 SMC3Q9UQE7 1217 aa16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 POTEIP0CG38 1075 aa16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 POTEJP0CG39 1038 aa16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 GNAQP50148 359 aa16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 JAG1P78504 1218 aa16.94■□□□□ 0.3
NIPAL3-202ENST00000339255 ATP2B2Q01814 1243 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms