RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 BPIFA3Q9BQP9 254 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 GBP3Q9H0R5 595 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 TNKSO95271 1327 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 TSPY2A6NKD2 308 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 IGHMBP2P38935 993 aaKnown RBP15.96■□□□□ 0.15
PCDH8-201ENST00000338862 ESR2Q92731 530 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 LY9Q9HBG7 655 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 TUBE1Q9UJT0 475 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 CASP8Q14790 479 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 PTPAQ15257 358 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 STX8Q9UNK0 236 aa15.96■□□□□ 0.15
PCDH8-201ENST00000338862 TECPR2O15040 1411 aa15.96■□□□□ 0.14
PCDH8-201ENST00000338862 SALL1Q9NSC2 1324 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 ATP2C2O75185 946 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 PLEKHA8P1O95397 391 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 KCTD19Q17RG1 926 aaPredicted RBP15.95■□□□□ 0.14
PCDH8-201ENST00000338862 TDRD12Q587J7 1177 aaKnown RBP15.95■□□□□ 0.14
PCDH8-201ENST00000338862 TTC38Q5R3I4 469 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 ENOX1Q8TC92 643 aaKnown RBP15.95■□□□□ 0.14
PCDH8-201ENST00000338862 ACSBG1Q96GR2 724 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 TEX13AQ9BXU3 409 aaPredicted RBP15.95■□□□□ 0.14
PCDH8-201ENST00000338862 STIM1Q13586 685 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 SPATA1Q5VX52 437 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 GPKOWQ92917 476 aaPredicted RBP eCLIP15.95■□□□□ 0.14
PCDH8-201ENST00000338862 CTAGE1Q96RT6 745 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 MMRN2Q9H8L6 949 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 MYO6Q9UM54 1294 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 GTF2A1P52655 376 aaPredicted RBP15.95■□□□□ 0.14
PCDH8-201ENST00000338862 SPA17Q15506 151 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 FUT8Q9BYC5 575 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 ANKARQ7Z5J8 1434 aa15.95■□□□□ 0.14
PCDH8-201ENST00000338862 CCDC194A0A1B0GVG4 234 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 PIP4K2BP78356 416 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 E2F4Q16254 413 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 IQUBQ8NA54 791 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 STRBPQ96SI9 672 aaKnown RBP15.94■□□□□ 0.14
PCDH8-201ENST00000338862 CNNM2Q9H8M5 875 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 CCDC151A5D8V7 595 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 AKR1B10O60218 316 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 NMT2O60551 498 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 CD44P16070 742 aaKnown RBP15.94■□□□□ 0.14
PCDH8-201ENST00000338862 ACTN2P35609 894 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 GYG1P46976 350 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 IFT81Q8WYA0 676 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 BCCIPQ9P287 314 aaKnown RBP eCLIP15.94■□□□□ 0.14
PCDH8-201ENST00000338862 FEZ2Q9UHY8 353 aaPredicted RBP15.94■□□□□ 0.14
PCDH8-201ENST00000338862 KCNJ18B7U540 433 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 PTPREP23469 700 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 PAK1Q13153 545 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 MORC3Q14149 939 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 KCNJ12Q14500 433 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 TTLL11Q8NHH1 800 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 PAGE5Q96GU1 130 aa15.94■□□□□ 0.14
PCDH8-201ENST00000338862 RNF41Q9H4P4 317 aaPredicted RBP15.94■□□□□ 0.14
PCDH8-201ENST00000338862 PDE8BO95263 885 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 USP5P45974 858 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 TOB1P50616 345 aaPredicted RBP15.93■□□□□ 0.14
PCDH8-201ENST00000338862 ATP2B2Q01814 1243 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 BRD3Q15059 726 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 HEATR3Q7Z4Q2 680 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 DZIP3Q86Y13 1208 aaKnown RBP15.93■□□□□ 0.14
PCDH8-201ENST00000338862 HSD3B7Q9H2F3 369 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.93■□□□□ 0.14
PCDH8-201ENST00000338862 LIG3P49916 1009 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 DYNLL1P63167 89 aaKnown RBP15.93■□□□□ 0.14
PCDH8-201ENST00000338862 SLC7A5Q01650 507 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 CUL4BQ13620 913 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 RASGRF1Q13972 1273 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 KRT31Q15323 416 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 KCTD16Q68DU8 428 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 CYP26C1Q6V0L0 522 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 SND1Q7KZF4 910 aaKnown RBP eCLIP15.93■□□□□ 0.14
PCDH8-201ENST00000338862 CCDC47Q96A33 483 aaKnown RBP15.93■□□□□ 0.14
PCDH8-201ENST00000338862 FMNL1O95466 1100 aaPredicted RBP15.93■□□□□ 0.14
PCDH8-201ENST00000338862 UQCRFS1P1P0C7P4 283 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 TBC1D8BQ0IIM8 1120 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 RNF187Q5TA31 235 aaPredicted RBP15.93■□□□□ 0.14
PCDH8-201ENST00000338862 SAMD1Q6SPF0 538 aaPredicted RBP15.93■□□□□ 0.14
PCDH8-201ENST00000338862 IGDCC4Q8TDY8 1250 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 AGXT2Q9BYV1 514 aa15.93■□□□□ 0.14
PCDH8-201ENST00000338862 PP2D1A8MPX8 630 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 ZRANB2O95218 330 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDH8-201ENST00000338862 ATP1A2P50993 1020 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 AFAP1L1Q8TED9 768 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 FAM207AQ9NSI2 230 aaPredicted RBP15.92■□□□□ 0.14
PCDH8-201ENST00000338862 EPN1Q9Y6I3 576 aaPredicted RBP15.92■□□□□ 0.14
PCDH8-201ENST00000338862 C3P01024 1663 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 PALLDQ8WX93 1383 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 MAGEB6P1A0A0J9YX57 407 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 RNF40O75150 1001 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 ASIC1P78348 528 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 CRACR2BQ8N4Y2 399 aaPredicted RBP15.92■□□□□ 0.14
PCDH8-201ENST00000338862 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDH8-201ENST00000338862 FBXO2Q9UK22 296 aaPredicted RBP15.92■□□□□ 0.14
PCDH8-201ENST00000338862 SAMM50Q9Y512 469 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 POTEB2H3BUK9 544 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 ZNF185O15231 689 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 MFAP3LO75121 409 aa15.92■□□□□ 0.14
PCDH8-201ENST00000338862 TTC31Q49AM3 519 aaPredicted RBP15.92■□□□□ 0.14
PCDH8-201ENST00000338862 GPR108Q9NPR9 543 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms