RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 CELF1Q92879 486 aaKnown RBP17.23■□□□□ 0.35
TNFSF13-201ENST00000338784 SHISA4Q96DD7 197 aa17.23■□□□□ 0.35
TNFSF13-201ENST00000338784 CGNQ9P2M7 1197 aaKnown RBP17.23■□□□□ 0.35
TNFSF13-201ENST00000338784 V9GY48 417 aaPredicted RBP17.23■□□□□ 0.35
TNFSF13-201ENST00000338784 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 TROAPQ12815 778 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 NAA30Q147X3 362 aaPredicted RBP17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 VPS72Q15906 364 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 SLC10A5Q5PT55 438 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 FBXO33Q7Z6M2 555 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 ENOX1Q8TC92 643 aaKnown RBP17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 CCDC34Q96HJ3 373 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 AATFQ9NY61 560 aaKnown RBP eCLIP17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 ZNF215Q9UL58 517 aaPredicted RBP17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 DDAH1O94760 285 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 PLEKHA8P1O95397 391 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 NSUN4Q96CB9 384 aaKnown RBP17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 ERO1AQ96HE7 468 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 TMX1Q9H3N1 280 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 BRMS1Q9HCU9 246 aa17.22■□□□□ 0.35
TNFSF13-201ENST00000338784 USP17L12C9JPN9 530 aa17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 TMEM232C9JQI7 657 aa17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 USP17L21D6R901 530 aa17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 RGL2O15211 777 aa17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 BMP15O95972 392 aa17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 USP49Q70CQ1 688 aa17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 SMAP1Q8IYB5 467 aaPredicted RBP17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 GRAMD1CQ8IYS0 662 aa17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 SPATA20Q8TB22 786 aa17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 NFE2L3Q9Y4A8 694 aa17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 DUOX1Q9NRD9 1551 aa17.21■□□□□ 0.35
TNFSF13-201ENST00000338784 hCG_1642624A0A1W2PR95 340 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 FAM205CA6NFA0 338 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 SLU7O95391 586 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 CDK11BP21127 795 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 FMR1Q06787 632 aaKnown RBP eCLIP17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 FEZ1Q99689 392 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 PDS5AQ29RF7 1337 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 CACNA1SQ13698 1873 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 ZNF18P17022 549 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 RPS8P62241 208 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 CBX1P83916 185 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 MECOMQ03112 1051 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 ZNF827Q17R98 1081 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 EARS2Q5JPH6 523 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 SYT10Q6XYQ8 523 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 TMTC3Q6ZXV5 915 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 FERMT2Q96AC1 680 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 CRNKL1Q9BZJ0 848 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 ZMYND15Q9H091 742 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 INTS13Q9NVM9 706 aa17.2■□□□□ 0.34
TNFSF13-201ENST00000338784 THSD7AQ9UPZ6 1657 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 ORC4O43929 436 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 HOMER1Q86YM7 354 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 BCL11BQ9C0K0 894 aaPredicted RBP17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 NYXQ9GZU5 481 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 L2HGDHQ9H9P8 463 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 SLFN14P0C7P3 912 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 KLRK1P26718 216 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 ERCC5P28715 1186 aaPredicted RBP17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 HIBADHP31937 336 aaKnown RBP17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 PLCD1P51178 756 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 HSP90AA4PQ58FG1 418 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 FCHSD1Q86WN1 690 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 DHX58Q96C10 678 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 EPSTI1Q96J88 318 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 NLRP3Q96P20 1036 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 ANKRD2Q9GZV1 360 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 DCP1AQ9NPI6 582 aaPredicted RBP17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
TNFSF13-201ENST00000338784 CNTNAP4Q9C0A0 1308 aa17.18■□□□□ 0.34
TNFSF13-201ENST00000338784 TBX2Q13207 712 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-201ENST00000338784 CT47A1Q5JQC4 288 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-201ENST00000338784 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 ARHGAP6O43182 974 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 KCNQ4P56696 695 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 ETF1P62495 437 aaKnown RBP17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 PTPN21Q16825 1174 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 SPECC1LQ69YQ0 1117 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 TRMT44Q8IYL2 757 aaKnown RBP17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 SYMPKQ92797 1274 aaKnown RBP17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 SETDB2Q96T68 719 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 CNTNAP5Q8WYK1 1306 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 A0A087X0B3 334 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 ZSCAN12O43309 604 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 GOLGA8FQ08AF8 430 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 GOLGA8DPQ0D2H9 430 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 NPY5RQ15761 445 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 FAM98CQ17RN3 349 aaKnown RBP17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 TMED8Q6PL24 325 aaPredicted RBP17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 SRBD1Q8N5C6 995 aaKnown RBP17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 PAGE5Q96GU1 130 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 TFCP2L1Q9NZI6 479 aa17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 ARPP21Q9UBL0 812 aaPredicted RBP17.17■□□□□ 0.34
TNFSF13-201ENST00000338784 NMT2O60551 498 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms