RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NAP1L4Q99733 375 aaKnown RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 ZSWIM4Q9H7M6 989 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 BIN2Q9UBW5 565 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 LUC7L2Q9Y383 392 aaKnown RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 GSG1L2A8MUP6 293 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 EIF3JO75822 258 aaKnown RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 EXOSC10Q01780 885 aaKnown RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 VPS36Q86VN1 386 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 BICDL2A1A5D9 508 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 AXDND1Q5T1B0 1012 aaPredicted RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 ARHGEF1Q92888 912 aaKnown RBP7.1□□□□□ -1.27
PRKDC-202ENST00000338368 SPAG5Q96R06 1193 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 ZNF609O15014 1411 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 SLC1A4P43007 532 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 ADCY7P51828 1080 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 MSL1Q68DK7 614 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 JADE2Q9NQC1 790 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 SAMM50Q9Y512 469 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 TBC1D8BQ0IIM8 1120 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 PAK1Q13153 545 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 BLZF1Q9H2G9 400 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 SH2D4AQ9H788 454 aa7.1□□□□□ -1.27
PRKDC-202ENST00000338368 MROH2AA6NES4 1674 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 PRPF3O43395 683 aaKnown RBP7.09□□□□□ -1.27
PRKDC-202ENST00000338368 CCT6AP40227 531 aaKnown RBP7.09□□□□□ -1.27
PRKDC-202ENST00000338368 PAFAH1B1P43034 410 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 LRMPQ12912 555 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 SNX29Q8TEQ0 813 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 SPATA31A1Q5TZJ5 1347 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 KARSQ15046 597 aaKnown RBP7.09□□□□□ -1.27
PRKDC-202ENST00000338368 OVOS2A0A0G2JMS6 1433 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 CDR1P51861 262 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 SPECC1LQ69YQ0 1117 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 STXBP4Q6ZWJ1 553 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 DYMQ7RTS9 669 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 RPAP1Q9BWH6 1393 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-202ENST00000338368 CAMTA2O94983 1202 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 DNA2P51530 1060 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 LONRF3Q496Y0 759 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 PGBD1Q96JS3 809 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 TIGD1Q96MW7 591 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 LZTFL1Q9NQ48 299 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.09□□□□□ -1.27
PRKDC-202ENST00000338368 V9GYY5 206 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-202ENST00000338368 TRIM37O94972 964 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 SUPT20HQ8NEM7 779 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 TBC1D9BQ66K14 1250 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 SGMS1Q86VZ5 419 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 GPKOWQ92917 476 aaPredicted RBP eCLIP7.09□□□□□ -1.275e-6■■■□□ 15.9
PRKDC-202ENST00000338368 MTA3Q9BTC8 594 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 REREQ9P2R6 1566 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 A0A087WWV3 80 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 CCDC102AQ96A19 550 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.09□□□□□ -1.27
PRKDC-202ENST00000338368 DPCR1Q3MIW9 517 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 CNGA4Q8IV77 575 aa7.09□□□□□ -1.27
PRKDC-202ENST00000338368 LRRC47Q8N1G4 583 aaKnown RBP7.09□□□□□ -1.27
PRKDC-202ENST00000338368 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.09□□□□□ -1.27
PRKDC-202ENST00000338368 ITPK1Q13572 414 aa7.09□□□□□ -1.28
PRKDC-202ENST00000338368 AKR1B15C9JRZ8 316 aaPredicted RBP7.09□□□□□ -1.28
PRKDC-202ENST00000338368 SCNN1DP51172 638 aa7.09□□□□□ -1.28
PRKDC-202ENST00000338368 SF3B3Q15393 1217 aaKnown RBP7.09□□□□□ -1.28
PRKDC-202ENST00000338368 ALX1Q15699 326 aa7.09□□□□□ -1.28
PRKDC-202ENST00000338368 CSGALNACT2Q8N6G5 542 aa7.09□□□□□ -1.28
PRKDC-202ENST00000338368 KRT83P78385 493 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 C11orf57Q6ZUT1 292 aaPredicted RBP7.08□□□□□ -1.28
PRKDC-202ENST00000338368 LARGE2Q8N3Y3 721 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 TRIML1Q8N9V2 468 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 STAG1Q8WVM7 1258 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 NOC4LQ9BVI4 516 aaKnown RBP7.08□□□□□ -1.28
PRKDC-202ENST00000338368 CSRNP2Q9H175 543 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 PTGDRQ13258 359 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 SKIDA1Q1XH10 827 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 GLT8D2Q9H1C3 349 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 INF2Q27J81 1249 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 SYCP3Q8IZU3 236 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 SRPRBQ9Y5M8 271 aaKnown RBP7.08□□□□□ -1.28
PRKDC-202ENST00000338368 NEDD4P46934 1319 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 ARHGAP6O43182 974 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 KRT86O43790 486 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 DGKHQ86XP1 1220 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 KCNB2Q92953 911 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 C2CD5Q86YS7 1000 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 NRBP1Q9UHY1 535 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 ZYXQ15942 572 aaKnown RBP7.08□□□□□ -1.28
PRKDC-202ENST00000338368 CCDC65Q8IXS2 484 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 USP17L8P0C7I0 530 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 CDC27P30260 824 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 DYNLL2Q96FJ2 89 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 FANCLQ9NW38 375 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 GUCA1BQ9UMX6 200 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 MEGF6O75095 1541 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 DLGAP5Q15398 846 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 KRT27Q7Z3Y8 459 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 LRRC8AQ8IWT6 810 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 MYO6Q9UM54 1294 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 CTNND2Q9UQB3 1225 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 PXDNQ92626 1479 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 WDR78Q5VTH9 848 aa7.08□□□□□ -1.28
PRKDC-202ENST00000338368 IGSF22Q8N9C0 903 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms