RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PSMB7Q99436 277 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 TPTE2Q6XPS3 522 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 HOOK3Q86VS8 718 aa17.91■□□□□ 0.46
NPHP3-201ENST00000337331 PCDH11XQ9BZA7 1347 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 PCDH11YQ9BZA8 1340 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 MYO1FO00160 1098 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 HMGB2P26583 209 aaKnown RBP17.9■□□□□ 0.46
NPHP3-201ENST00000337331 PCK1P35558 622 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 ZAP70P43403 619 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 TEX11Q8IYF3 940 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 ANKS4BQ8N8V4 417 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 E7EWF7 191 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 ENC1O14682 589 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 CTNNA2P26232 953 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 GNA11P29992 359 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 PDCLQ13371 301 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 PPP4R3AQ6IN85 833 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 FCHSD1Q86WN1 690 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 PCDHA7Q9UN72 937 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 RPAP1Q9BWH6 1393 aaPredicted RBP17.9■□□□□ 0.46
NPHP3-201ENST00000337331 BICDL2A1A5D9 508 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 NEURL1BA8MQ27 555 aa17.9■□□□□ 0.46
NPHP3-201ENST00000337331 ZRANB2O95218 330 aaKnown RBP eCLIP17.9■□□□□ 0.46
NPHP3-201ENST00000337331 NUCKS1Q9H1E3 243 aaKnown RBP17.9■□□□□ 0.46
NPHP3-201ENST00000337331 SCRN1Q12765 414 aa17.89■□□□□ 0.46
NPHP3-201ENST00000337331 LSG1Q9H089 658 aaKnown RBP17.89■□□□□ 0.46
NPHP3-201ENST00000337331 VSNL1P62760 191 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 WDR78Q5VTH9 848 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 PPP1R12CQ9BZL4 782 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 PARP3Q9Y6F1 533 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 SSH2Q76I76 1423 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 CUTAO60888 179 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 IRX1P78414 480 aaPredicted RBP17.89■□□□□ 0.45
NPHP3-201ENST00000337331 TBC1D8BQ0IIM8 1120 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 UBE4AQ14139 1066 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 LETM2Q2VYF4 491 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 SUGP1Q8IWZ8 645 aaKnown RBP17.89■□□□□ 0.45
NPHP3-201ENST00000337331 PIK3R5Q8WYR1 880 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 RRP36Q96EU6 259 aaKnown RBP17.89■□□□□ 0.45
NPHP3-201ENST00000337331 MRFAP1Q9Y605 127 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 ERVK-7P63135 1459 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 PNOCQ13519 176 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 PUM3Q15397 648 aaKnown RBP17.89■□□□□ 0.45
NPHP3-201ENST00000337331 YIPF3Q9GZM5 350 aa17.89■□□□□ 0.45
NPHP3-201ENST00000337331 BEND3Q5T5X7 828 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 NCAPH2Q6IBW4 605 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 SPATS2Q86XZ4 545 aaKnown RBP17.88■□□□□ 0.45
NPHP3-201ENST00000337331 YEATS2Q9ULM3 1422 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 HGSO14964 777 aaPredicted RBP17.88■□□□□ 0.45
NPHP3-201ENST00000337331 GGCXP38435 758 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 TRIM68Q6AZZ1 485 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 TOGARAM2Q6ZUX3 1019 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 SAR1BQ9Y6B6 198 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 ADALQ6DHV7 355 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 CCDC174Q6PII3 467 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 TCP11Q8WWU5 503 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 KLC4Q9NSK0 619 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 NEO1Q92859 1461 aa17.88■□□□□ 0.45
NPHP3-201ENST00000337331 FAM135BQ49AJ0 1406 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 TAF5LO75529 589 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 LDHBP07195 334 aaKnown RBP17.87■□□□□ 0.45
NPHP3-201ENST00000337331 PAX7P23759 505 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 MYSM1Q5VVJ2 828 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 MLKLQ8NB16 471 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 ARHGEF5Q12774 1597 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 PIK3AP1Q6ZUJ8 805 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 DHX40Q8IX18 779 aaKnown RBP17.87■□□□□ 0.45
NPHP3-201ENST00000337331 CEP120Q8N960 986 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 SH3GL3Q99963 347 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 SELENOOQ9BVL4 669 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 ARHGEF10O15013 1369 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 PSMD2Q13200 908 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 KCNJ14Q9UNX9 436 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 PREX2Q70Z35 1606 aa17.87■□□□□ 0.45
NPHP3-201ENST00000337331 SMIM24O75264 130 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 TBC1D5Q92609 795 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 STAMQ92783 540 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 SOWAHDA6NJG2 315 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 GOLGA8KD6RF30 607 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 ZNF804AQ7Z570 1209 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 DSCC1Q9BVC3 393 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 CTNND2Q9UQB3 1225 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 ADCY10Q96PN6 1610 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 SKAP2O75563 359 aaPredicted RBP17.86■□□□□ 0.45
NPHP3-201ENST00000337331 MAP3K9P80192 1104 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 ZC3H12CQ9C0D7 883 aaKnown RBP17.86■□□□□ 0.45
NPHP3-201ENST00000337331 POLD4Q9HCU8 107 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 STAP2Q9UGK3 403 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 ATP10AO60312 1499 aa17.86■□□□□ 0.45
NPHP3-201ENST00000337331 hCG_1642624A0A1W2PR95 340 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 PDE8AO60658 829 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 SETSIPP0DME0 302 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 PSEN1P49768 467 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 KCNG1Q9UIX4 513 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 KDM5DQ9BY66 1539 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 KRT9P35527 623 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 ZNF532Q9HCE3 1301 aa17.85■□□□□ 0.45
NPHP3-201ENST00000337331 EIF4E1BA6NMX2 242 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms