RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 CEP104O60308 925 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 CTNNA1P35221 906 aaKnown RBP14.78□□□□□ -0.04
COL2A1-201ENST00000337299 CYP27A1Q02318 531 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 C2CD5Q86YS7 1000 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 KLHL34Q8N239 644 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 TRMT112Q9UI30 125 aaKnown RBP14.78□□□□□ -0.04
COL2A1-201ENST00000337299 SASH3O75995 380 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 FGFR1OPO95684 399 aaKnown RBP14.78□□□□□ -0.04
COL2A1-201ENST00000337299 SLC39A14Q15043 492 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 TEX11Q8IYF3 940 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 RPGRIP1Q96KN7 1286 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 TRIM14Q14142 442 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 GKAP1Q5VSY0 366 aaPredicted RBP14.78□□□□□ -0.04
COL2A1-201ENST00000337299 A0A1W2PRG0 241 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 CORO7P57737 925 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 ATP11AP98196 1134 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 ZNF594Q96JF6 807 aaPredicted RBP14.78□□□□□ -0.04
COL2A1-201ENST00000337299 VAT1LQ9HCJ6 419 aa14.78□□□□□ -0.04
COL2A1-201ENST00000337299 TPX2Q9ULW0 747 aaKnown RBP14.77□□□□□ -0.04
COL2A1-201ENST00000337299 ADCY9O60503 1353 aa14.77□□□□□ -0.04
COL2A1-201ENST00000337299 KCNJ18B7U540 433 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 ZFYP08048 801 aaPredicted RBP14.77□□□□□ -0.05
COL2A1-201ENST00000337299 SLC8A1P32418 973 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 MAP3K9P80192 1104 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 KCNJ12Q14500 433 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 RBBP5Q15291 538 aaKnown RBP14.77□□□□□ -0.05
COL2A1-201ENST00000337299 SPATA1Q5VX52 437 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 ZNF274Q96GC6 653 aaPredicted RBP14.77□□□□□ -0.05
COL2A1-201ENST00000337299 ZCCHC11Q5TAX3 1644 aaKnown RBP14.77□□□□□ -0.05
COL2A1-201ENST00000337299 IFNAR2P48551 515 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 CFAP221Q4G0U5 840 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 RUFY4Q6ZNE9 571 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 NLRC4Q9NPP4 1024 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 HELLSQ9NRZ9 838 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 PRR36Q9H6K5 1346 aa14.77□□□□□ -0.05
COL2A1-201ENST00000337299 MYO1FO00160 1098 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 RAPGEF1Q13905 1077 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 CCDC51Q96ER9 411 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 KAT14Q9H8E8 782 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 MAN1B1Q9UKM7 699 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 EDC4Q6P2E9 1401 aaKnown RBP14.76□□□□□ -0.05
COL2A1-201ENST00000337299 CASP1P29466 404 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 HNRNPH1P31943 449 aaKnown RBP14.76□□□□□ -0.05
COL2A1-201ENST00000337299 CCDC63Q8NA47 563 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 SLC4A4Q9Y6R1 1079 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 TEX33O43247 280 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 HSPD1P10809 573 aaKnown RBP14.76□□□□□ -0.05
COL2A1-201ENST00000337299 PLCD1P51178 756 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 LMNTD2Q8IXW0 634 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 TSGA10Q9BZW7 698 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 TAOK3Q9H2K8 898 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 RNF41Q9H4P4 317 aaPredicted RBP14.76□□□□□ -0.05
COL2A1-201ENST00000337299 MRPL44Q9H9J2 332 aaKnown RBP14.76□□□□□ -0.05
COL2A1-201ENST00000337299 POLR3EQ9NVU0 708 aa14.76□□□□□ -0.05
COL2A1-201ENST00000337299 BACH1O14867 736 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 IKQ13123 557 aaPredicted RBP14.75□□□□□ -0.05
COL2A1-201ENST00000337299 CLASP1Q7Z460 1538 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 KIRREL3Q8IZU9 778 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 NOX5Q96PH1 765 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 EPB41L5Q9HCM4 733 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 MLH3Q9UHC1 1453 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 TAF6LQ9Y6J9 622 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 GPAA1O43292 621 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 NBPF14Q5TI25 921 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 KRT2P35908 639 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 IL15P40933 162 aaPredicted RBP14.75□□□□□ -0.05
COL2A1-201ENST00000337299 LRRC45Q96CN5 670 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 CALML4Q96GE6 196 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 CWC25Q9NXE8 425 aaPredicted RBP14.75□□□□□ -0.05
COL2A1-201ENST00000337299 ADGRG1Q9Y653 693 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 ADGBQ8N7X0 1667 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 MORC3Q14149 939 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 LRRC31Q6UY01 552 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 SH2D3CQ8N5H7 860 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 MIGA1Q8NAN2 632 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 NOA1Q8NC60 698 aaKnown RBP14.75□□□□□ -0.05
COL2A1-201ENST00000337299 IL17REQ8NFR9 667 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 YIPF3Q9GZM5 350 aa14.75□□□□□ -0.05
COL2A1-201ENST00000337299 ROBO2Q9HCK4 1378 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 TMEM110-MUSTN1A8MSY1 372 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 BMP15O95972 392 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 RRAGAQ7L523 313 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 VSIG1Q86XK7 387 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 SPATS2Q86XZ4 545 aaKnown RBP14.74□□□□□ -0.05
COL2A1-201ENST00000337299 HELBQ8NG08 1087 aaPredicted RBP14.74□□□□□ -0.05
COL2A1-201ENST00000337299 FOXN1O15353 648 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 ATP5JP18859 108 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 MXRA7P84157 204 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 KIF23Q02241 960 aaPredicted RBP14.74□□□□□ -0.05
COL2A1-201ENST00000337299 SLC20A2Q08357 652 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 PNKPQ96T60 521 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 CD248Q9HCU0 757 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 VPS54Q9P1Q0 977 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 CDC42BPAQ5VT25 1732 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 NR1D1P20393 614 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 AMPD3Q01432 767 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 FAM133BQ5BKY9 247 aaKnown RBP14.74□□□□□ -0.05
COL2A1-201ENST00000337299 INTS8Q75QN2 995 aaKnown RBP14.74□□□□□ -0.05
COL2A1-201ENST00000337299 DPH5Q9H2P9 285 aa14.74□□□□□ -0.05
COL2A1-201ENST00000337299 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms