RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 SPATA5Q8NB90 893 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 FAM135BQ49AJ0 1406 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 GIGYF1O75420 1035 aaPredicted RBP13.61□□□□□ -0.23
FN1-202ENST00000336916 DCUN1D2Q6PH85 259 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
FN1-202ENST00000336916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.6□□□□□ -0.234e-6■■■□□ 15.9
FN1-202ENST00000336916 LEO1Q8WVC0 666 aaPredicted RBP13.6□□□□□ -0.23
FN1-202ENST00000336916 CDHR1Q96JP9 859 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 TMEM110-MUSTN1A8MSY1 372 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 PPIP5K2O43314 1243 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 SMC5Q8IY18 1101 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 GPCPD1Q9NPB8 672 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 PSDA5PKW4 1024 aaPredicted RBP13.6□□□□□ -0.23
FN1-202ENST00000336916 LAD1O00515 517 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 THAP12O43422 761 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 XAGE2Q96GT9 111 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 CSRNP1Q96S65 589 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 BAG1Q99933 345 aaPredicted RBP13.6□□□□□ -0.23
FN1-202ENST00000336916 ZBTB40Q9NUA8 1239 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 GAS7O60861 476 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 AK2P54819 239 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 GABPAQ06546 454 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 PAK1Q13153 545 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 RUFY4Q6ZNE9 571 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 RAB17Q9H0T7 212 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 DNM1Q05193 864 aaKnown RBP13.6□□□□□ -0.23
FN1-202ENST00000336916 CCDC121Q6ZUS5 278 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 ZNF365Q70YC5 407 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 RSPH3Q86UC2 560 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 CCDC89Q8N998 374 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 MAP3K4Q9Y6R4 1608 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 TBC1D8BQ0IIM8 1120 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 ARHGEF16Q5VV41 709 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 NECAB1Q8N987 351 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 IFT122Q9HBG6 1241 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 KDRP35968 1356 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 PLEKHG1Q9ULL1 1385 aa13.6□□□□□ -0.23
FN1-202ENST00000336916 EBAG9O00559 213 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 CIB2O75838 187 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 TPD52P55327 224 aaPredicted RBP13.59□□□□□ -0.23
FN1-202ENST00000336916 GCNT3O95395 438 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 CPLX4Q7Z7G2 160 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 NLGN1Q8N2Q7 840 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.59□□□□□ -0.233e-21■■■■■ 48.7
FN1-202ENST00000336916 TRPC5Q9UL62 973 aaPredicted RBP13.59□□□□□ -0.23
FN1-202ENST00000336916 RAPGEF1Q13905 1077 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 NONOQ15233 471 aaKnown RBP eCLIP13.59□□□□□ -0.23
FN1-202ENST00000336916 SPOUT1Q5T280 376 aaKnown RBP13.59□□□□□ -0.23
FN1-202ENST00000336916 RUNDC3BQ96NL0 473 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 ADD3Q9UEY8 706 aaKnown RBP13.59□□□□□ -0.23
FN1-202ENST00000336916 YARSP54577 528 aaKnown RBP13.59□□□□□ -0.23
FN1-202ENST00000336916 APOBRQ0VD83 1088 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 PPFIA1Q13136 1202 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 P3H4Q92791 437 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 BRPF3Q9ULD4 1205 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 TMEM2Q9UHN6 1383 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 PDE4DQ08499 809 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 SUPT20HL1Q3ZLR7 823 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 ANO1Q5XXA6 986 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 DONSONQ9NYP3 566 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 IRX4P78413 519 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 CCDC122Q5T0U0 273 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 FAM160B1Q5W0V3 765 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 PLEKHM2Q8IWE5 1019 aa13.59□□□□□ -0.23
FN1-202ENST00000336916 ANXA1P04083 346 aa13.58□□□□□ -0.23
FN1-202ENST00000336916 TTC38Q5R3I4 469 aa13.58□□□□□ -0.23
FN1-202ENST00000336916 FAM196AQ6ZSG2 479 aa13.58□□□□□ -0.23
FN1-202ENST00000336916 ZBTB38Q8NAP3 1195 aaPredicted RBP13.58□□□□□ -0.23
FN1-202ENST00000336916 AATFQ9NY61 560 aaKnown RBP eCLIP13.58□□□□□ -0.232e-10■■■■■ 89.9
FN1-202ENST00000336916 KCNH3Q9ULD8 1083 aa13.58□□□□□ -0.23
FN1-202ENST00000336916 SBNO2Q9Y2G9 1366 aa13.58□□□□□ -0.23
FN1-202ENST00000336916 NFKBIAP25963 317 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 PPFIBP2Q8ND30 876 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 CCDC17Q96LX7 622 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 RASSF2P50749 326 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 PPP2R5AQ15172 486 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 IPO4Q8TEX9 1081 aaKnown RBP13.58□□□□□ -0.24
FN1-202ENST00000336916 CCPG1Q9ULG6 757 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 DISP1Q96F81 1524 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 MTMR3Q13615 1198 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 TMTC1Q8IUR5 882 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 FAM89AQ96GI7 184 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 DNAI1Q9UI46 699 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 I3L4J1 428 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 PHBP35232 272 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 MFSD14BQ5SR56 506 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 STMN2Q93045 179 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 LRRC2Q9BYS8 371 aa13.58□□□□□ -0.24
FN1-202ENST00000336916 CLTCQ00610 1675 aaKnown RBP13.58□□□□□ -0.24
FN1-202ENST00000336916 KRT9P35527 623 aa13.57□□□□□ -0.24
FN1-202ENST00000336916 PHLPP2Q6ZVD8 1323 aa13.57□□□□□ -0.24
FN1-202ENST00000336916 ZNF233A6NK53 670 aa13.57□□□□□ -0.24
FN1-202ENST00000336916 GPATCH4Q5T3I0 446 aaKnown RBP13.57□□□□□ -0.24
FN1-202ENST00000336916 CSGALNACT2Q8N6G5 542 aa13.57□□□□□ -0.24
FN1-202ENST00000336916 GDPD2Q9HCC8 539 aa13.57□□□□□ -0.24
FN1-202ENST00000336916 LEMD3Q9Y2U8 911 aa13.57□□□□□ -0.24
FN1-202ENST00000336916 MED23Q9ULK4 1368 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms