RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 HOMER1Q86YM7 354 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 RPGRQ92834 1020 aaKnown RBP10.16□□□□□ -0.78
SNCA-201ENST00000336904 BLZF1Q9H2G9 400 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 BCORQ6W2J9 1755 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 SERPINC1P01008 464 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 FMR1Q06787 632 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNCA-201ENST00000336904 GJD4Q96KN9 370 aaPredicted RBP10.16□□□□□ -0.78
SNCA-201ENST00000336904 NAT10Q9H0A0 1025 aaKnown RBP10.16□□□□□ -0.78
SNCA-201ENST00000336904 HSD3B7Q9H2F3 369 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 MKNK2Q9HBH9 465 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 HPSEQ9Y251 543 aa10.16□□□□□ -0.78
SNCA-201ENST00000336904 TNNT1P13805 278 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 CFAP100Q494V2 611 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 FAM177A1Q8N128 213 aaPredicted RBP10.15□□□□□ -0.78
SNCA-201ENST00000336904 EEF2KMTQ96G04 330 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 IL17RBQ9NRM6 502 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 SPTLC3Q9NUV7 552 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 MAPK8IP1Q9UQF2 711 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 NLRP5P59047 1200 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 FANCCQ00597 558 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 FUT2Q10981 343 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 SLC10A5Q5PT55 438 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 JMYQ8N9B5 988 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 MYH6P13533 1939 aa10.15□□□□□ -0.78
SNCA-201ENST00000336904 PP2D1A8MPX8 630 aa10.15□□□□□ -0.79
SNCA-201ENST00000336904 RAD21O60216 631 aa10.15□□□□□ -0.79
SNCA-201ENST00000336904 RCSD1Q6JBY9 416 aa10.15□□□□□ -0.79
SNCA-201ENST00000336904 TYW1BQ6NUM6 668 aa10.15□□□□□ -0.79
SNCA-201ENST00000336904 ARMCX5Q6P1M9 558 aa10.15□□□□□ -0.79
SNCA-201ENST00000336904 CTCFLQ8NI51 663 aaPredicted RBP10.15□□□□□ -0.79
SNCA-201ENST00000336904 BRIP1Q9BX63 1249 aa10.15□□□□□ -0.79
SNCA-201ENST00000336904 DUOX1Q9NRD9 1551 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 FAM205AQ6ZU69 1335 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 CCDC196A0A1B0GTZ2 297 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 CUTAO60888 179 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 PPP6R2O75170 966 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 SERPINB2P05120 415 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 KRT2P35908 639 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 CCZ1BP86790 482 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 CCZ1P86791 482 aaPredicted RBP10.14□□□□□ -0.79
SNCA-201ENST00000336904 FNBP4Q8N3X1 1017 aaPredicted RBP10.14□□□□□ -0.79
SNCA-201ENST00000336904 SYMPKQ92797 1274 aaKnown RBP10.14□□□□□ -0.79
SNCA-201ENST00000336904 MAN1B1Q9UKM7 699 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 CNTNAP5Q8WYK1 1306 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 SCNN1DP51172 638 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 GRAPQ13588 217 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 POSTNQ15063 836 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 DOK7Q18PE1 504 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 SLC35G1Q2M3R5 365 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 TMTC3Q6ZXV5 915 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 GRAPLQ8TC17 118 aaPredicted RBP10.14□□□□□ -0.79
SNCA-201ENST00000336904 WASF1Q92558 559 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 ANKRD2Q9GZV1 360 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 SAMSN1Q9NSI8 373 aaKnown RBP10.14□□□□□ -0.79
SNCA-201ENST00000336904 STK36Q9NRP7 1315 aa10.14□□□□□ -0.79
SNCA-201ENST00000336904 A0A1B0GUL6 1792 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 TRIM75PA6NK02 468 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 TSPY3P0CV98 308 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 TSPY8P0CW00 308 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 GYS1P13807 737 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 BTDP43251 543 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 DDR1Q08345 913 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 PTGDRQ13258 359 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 NPY5RQ15761 445 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 HEATR3Q7Z4Q2 680 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 MYRIPQ8NFW9 859 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 MRFAP1L1Q96HT8 127 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 POLLQ9UGP5 575 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.13□□□□□ -0.79
SNCA-201ENST00000336904 SCN7AQ01118 1682 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 PTPREP23469 700 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 UBASH3AP57075 661 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 MFSD14BQ5SR56 506 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 PNMA1Q8ND90 353 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 ZBTB9Q96C00 473 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 PHF20Q9BVI0 1012 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 KAT14Q9H8E8 782 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 ANAPC4Q9UJX5 808 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 PCDHAC2Q9Y5I4 1007 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 TIAM2Q8IVF5 1701 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 RREB1Q92766 1687 aa10.13□□□□□ -0.79
SNCA-201ENST00000336904 FAM196BA6NMK8 535 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 CACNB3P54284 484 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 GTF2IP78347 998 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 RILPL1Q5EBL4 403 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 USP17L2Q6R6M4 530 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 SARM1Q6SZW1 724 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 TMTC2Q8N394 836 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 MED15Q96RN5 788 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 RNF26Q9BY78 433 aaPredicted RBP10.12□□□□□ -0.79
SNCA-201ENST00000336904 FOXP1Q9H334 677 aaPredicted RBP10.12□□□□□ -0.79
SNCA-201ENST00000336904 CDK11BP21127 795 aaKnown RBP10.12□□□□□ -0.79
SNCA-201ENST00000336904 CPLX3Q8WVH0 158 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 UBA5Q9GZZ9 404 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 KCNQ5Q9NR82 932 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 FRMPD2Q68DX3 1309 aaPredicted RBP10.12□□□□□ -0.79
SNCA-201ENST00000336904 ATP2B2Q01814 1243 aa10.12□□□□□ -0.79
SNCA-201ENST00000336904 DHX8Q14562 1220 aaKnown RBP10.12□□□□□ -0.79
SNCA-201ENST00000336904 IL17AQ16552 155 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms