RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CCDC40Q4G0X9 1142 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 GRAMD1CQ8IYS0 662 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 OGFOD1Q8N543 542 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 BAG1Q99933 345 aaPredicted RBP7.32□□□□□ -1.24
HMG20A-201ENST00000336216 TMEM51Q9NW97 253 aa7.32□□□□□ -1.24
HMG20A-201ENST00000336216 IL6STP40189 918 aaPredicted RBP7.31□□□□□ -1.24
HMG20A-201ENST00000336216 GTF2A1P52655 376 aaPredicted RBP7.31□□□□□ -1.24
HMG20A-201ENST00000336216 ST3GAL1Q11201 340 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 PRKG1Q13976 671 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 DNAJC21Q5F1R6 531 aaKnown RBP7.31□□□□□ -1.24
HMG20A-201ENST00000336216 ZNF569Q5MCW4 686 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 APOA5Q6Q788 366 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 DTHD1Q6ZMT9 781 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 ANKRD2Q9GZV1 360 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 GGA1Q9UJY5 639 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 NFE2L3Q9Y4A8 694 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 RGPD1P0DJD0 1748 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.31□□□□□ -1.24
HMG20A-201ENST00000336216 DEXIO95424 95 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 PFKFB1P16118 471 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 IQCB1Q15051 598 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 KAZALD1Q96I82 304 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 LLPHQ9BRT6 129 aaKnown RBP7.31□□□□□ -1.24
HMG20A-201ENST00000336216 ACBD3Q9H3P7 528 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 FANCLQ9NW38 375 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 TRIM66O15016 1216 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 GSTO1P78417 241 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 CCZ1BP86790 482 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 CCZ1P86791 482 aaPredicted RBP7.31□□□□□ -1.24
HMG20A-201ENST00000336216 ODF2Q5BJF6 829 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 WWC2Q6AWC2 1192 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 DYMQ7RTS9 669 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 GOLGA1Q92805 767 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 CELF1Q92879 486 aaKnown RBP7.31□□□□□ -1.24
HMG20A-201ENST00000336216 DYNLL2Q96FJ2 89 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 RAB34Q9BZG1 259 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 TBC1D7Q9P0N9 293 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 SERTAD1Q9UHV2 236 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 PARP3Q9Y6F1 533 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 NCAPD2Q15021 1401 aa7.31□□□□□ -1.24
HMG20A-201ENST00000336216 WDHD1O75717 1129 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 PRDX5P30044 214 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 MYL5Q02045 173 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 PDIA6Q15084 440 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 USH1GQ495M9 461 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 RILPL1Q5EBL4 403 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 E4F1Q66K89 784 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 SMYD4Q8IYR2 804 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 ZNF274Q96GC6 653 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 TSPYL1Q9H0U9 437 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 FRMPD2Q68DX3 1309 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 RGPD2P0DJD1 1756 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 AKR1B10O60218 316 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 CCNT1O60563 726 aaKnown RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 USP17L8P0C7I0 530 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 TTLL12Q14166 644 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 SYCP1Q15431 976 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 SPA17Q15506 151 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 DPP8Q6V1X1 898 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 MAEAQ7L5Y9 396 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 LRRC47Q8N1G4 583 aaKnown RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 CAPZA3Q96KX2 299 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 EXOC1Q9NV70 894 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 TTF2Q9UNY4 1162 aaKnown RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 MYCNP04198 464 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 ADD2P35612 726 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 SSR1P43307 286 aaKnown RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 FOXO4P98177 505 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 ARMCX5Q6P1M9 558 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 STOX1Q6ZVD7 989 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 IQUBQ8NA54 791 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 RRP36Q96EU6 259 aaKnown RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 PDE11AQ9HCR9 933 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 JADE2Q9NQC1 790 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 SALL3Q9BXA9 1300 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 LTN1O94822 1766 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 SLIT3O75094 1523 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 TMEM232C9JQI7 657 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 CHMP2AO43633 222 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 NMT2O60551 498 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 PARP1P09874 1014 aaKnown RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 IRX3P78415 501 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 TTC38Q5R3I4 469 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 DHX40Q8IX18 779 aaKnown RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 CPXCR1Q8N123 301 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 BIN2Q9UBW5 565 aaPredicted RBP7.3□□□□□ -1.24
HMG20A-201ENST00000336216 FBXO3Q9UK99 471 aa7.3□□□□□ -1.24
HMG20A-201ENST00000336216 SOS2Q07890 1332 aaPredicted RBP7.29□□□□□ -1.24
HMG20A-201ENST00000336216 NFAT5O94916 1531 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 YEATS4O95619 227 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 CYP2D6P10635 497 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 CASP1P29466 404 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 CACNB3P54284 484 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 UBXN1Q04323 297 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 INF2Q27J81 1249 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 KANK3Q6NY19 840 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 ATG9AQ7Z3C6 839 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 MICALL1Q8N3F8 863 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 PNMA1Q8ND90 353 aa7.29□□□□□ -1.24
HMG20A-201ENST00000336216 CUL5Q93034 780 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms