RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ZNF341Q9BYN7 854 aa25.26■■□□□ 1.63
TPM1-204ENST00000334895 ZNF112Q9UJU3 913 aa25.26■■□□□ 1.63
TPM1-204ENST00000334895 LIMCH1Q9UPQ0 1083 aa25.26■■□□□ 1.63
TPM1-204ENST00000334895 K7ELQ4 463 aaPredicted RBP25.26■■□□□ 1.63
TPM1-204ENST00000334895 TRAF5O00463 557 aa25.26■■□□□ 1.63
TPM1-204ENST00000334895 CAP2P40123 477 aa25.26■■□□□ 1.63
TPM1-204ENST00000334895 ME3Q16798 604 aa25.26■■□□□ 1.63
TPM1-204ENST00000334895 ANKS1AQ92625 1134 aa25.26■■□□□ 1.63
TPM1-204ENST00000334895 TMX3Q96JJ7 454 aa25.26■■□□□ 1.63
TPM1-204ENST00000334895 MTMR4Q9NYA4 1195 aa25.26■■□□□ 1.63
TPM1-204ENST00000334895 ERICH2A1L162 156 aa25.25■■□□□ 1.63
TPM1-204ENST00000334895 INPP5BP32019 993 aa25.25■■□□□ 1.63
TPM1-204ENST00000334895 SEPT2Q15019 361 aa25.25■■□□□ 1.63
TPM1-204ENST00000334895 TMEM179Q6ZVK1 233 aa25.25■■□□□ 1.63
TPM1-204ENST00000334895 DGKHQ86XP1 1220 aa25.25■■□□□ 1.63
TPM1-204ENST00000334895 ZBTB21Q9ULJ3 1066 aa25.25■■□□□ 1.63
TPM1-204ENST00000334895 USP2O75604 605 aaPredicted RBP25.24■■□□□ 1.63
TPM1-204ENST00000334895 IFIT1BQ5T764 474 aaKnown RBP25.24■■□□□ 1.63
TPM1-204ENST00000334895 KLRG1Q96E93 195 aa25.24■■□□□ 1.63
TPM1-204ENST00000334895 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.24■■□□□ 1.63
TPM1-204ENST00000334895 DOCK1Q14185 1865 aa25.24■■□□□ 1.63
TPM1-204ENST00000334895 OTOFQ9HC10 1997 aa25.24■■□□□ 1.63
TPM1-204ENST00000334895 KLF18A0A0U1RQI7 1052 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 PRKG1Q13976 671 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 CCDC178Q5BJE1 867 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 PASKQ96RG2 1323 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 ST3GAL1Q11201 340 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 APOA5Q6Q788 366 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 SIAH1Q8IUQ4 282 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 WRNIP1Q96S55 665 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 CABP5Q9NP86 173 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 STX8Q9UNK0 236 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 HPS5Q9UPZ3 1129 aa25.23■■□□□ 1.63
TPM1-204ENST00000334895 MYH4Q9Y623 1939 aa25.22■■□□□ 1.63
TPM1-204ENST00000334895 CTNND1O60716 968 aaKnown RBP25.22■■□□□ 1.63
TPM1-204ENST00000334895 PDIA3P30101 505 aaKnown RBP25.22■■□□□ 1.63
TPM1-204ENST00000334895 BECN1Q14457 450 aa25.22■■□□□ 1.63
TPM1-204ENST00000334895 NFXL1Q6ZNB6 911 aa25.22■■□□□ 1.63
TPM1-204ENST00000334895 RAB11FIP4Q86YS3 637 aa25.22■■□□□ 1.63
TPM1-204ENST00000334895 TMTC2Q8N394 836 aa25.22■■□□□ 1.63
TPM1-204ENST00000334895 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.22■■□□□ 1.63
TPM1-204ENST00000334895 TMEM47Q9BQJ4 181 aa25.22■■□□□ 1.63
TPM1-204ENST00000334895 CCDC69A6NI79 296 aa25.21■■□□□ 1.63
TPM1-204ENST00000334895 SLC4A3P48751 1232 aa25.21■■□□□ 1.63
TPM1-204ENST00000334895 RAB3GAP1Q15042 981 aa25.21■■□□□ 1.63
TPM1-204ENST00000334895 ZNF274Q96GC6 653 aaPredicted RBP25.21■■□□□ 1.63
TPM1-204ENST00000334895 MYL10Q9BUA6 226 aa25.21■■□□□ 1.63
TPM1-204ENST00000334895 KANSL2Q9H9L4 492 aa25.21■■□□□ 1.63
TPM1-204ENST00000334895 TTLL1O95922 423 aa25.2■■□□□ 1.62
TPM1-204ENST00000334895 ICA1Q05084 483 aa25.2■■□□□ 1.62
TPM1-204ENST00000334895 ZNF654Q8IZM8 581 aa25.2■■□□□ 1.62
TPM1-204ENST00000334895 ZKSCAN4Q969J2 545 aaPredicted RBP25.2■■□□□ 1.62
TPM1-204ENST00000334895 ZSCAN31Q96LW9 406 aaPredicted RBP25.2■■□□□ 1.62
TPM1-204ENST00000334895 GOLGA8BA8MQT2 603 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 EEF2P13639 858 aaKnown RBP25.19■■□□□ 1.62
TPM1-204ENST00000334895 STK3Q13188 491 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 CCDC84Q86UT8 332 aaPredicted RBP25.19■■□□□ 1.62
TPM1-204ENST00000334895 NECAB1Q8N987 351 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 SLC12A7Q9Y666 1083 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 PFKFB2O60825 505 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 ASNSP08243 561 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 TOP1P11387 765 aaKnown RBP25.19■■□□□ 1.62
TPM1-204ENST00000334895 RXRAP19793 462 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 NF2P35240 595 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 TROAPQ12815 778 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 MOB2Q70IA6 237 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 SH2B1Q9NRF2 756 aaPredicted RBP25.19■■□□□ 1.62
TPM1-204ENST00000334895 NYAP2Q9P242 653 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 CLIP2Q9UDT6 1046 aa25.19■■□□□ 1.62
TPM1-204ENST00000334895 NAP1L2Q9ULW6 460 aaPredicted RBP25.19■■□□□ 1.62
TPM1-204ENST00000334895 PPP1R12BO60237 982 aaPredicted RBP25.18■■□□□ 1.62
TPM1-204ENST00000334895 CUL4AQ13619 759 aa25.18■■□□□ 1.62
TPM1-204ENST00000334895 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.18■■□□□ 1.62
TPM1-204ENST00000334895 MICU3Q86XE3 530 aa25.18■■□□□ 1.62
TPM1-204ENST00000334895 SCYL3Q8IZE3 742 aa25.18■■□□□ 1.62
TPM1-204ENST00000334895 LRRC47Q8N1G4 583 aaKnown RBP25.18■■□□□ 1.62
TPM1-204ENST00000334895 PNMA1Q8ND90 353 aa25.18■■□□□ 1.62
TPM1-204ENST00000334895 IPO9Q96P70 1041 aaKnown RBP25.18■■□□□ 1.62
TPM1-204ENST00000334895 KAT14Q9H8E8 782 aa25.18■■□□□ 1.62
TPM1-204ENST00000334895 GINM1Q9NU53 330 aa25.18■■□□□ 1.62
TPM1-204ENST00000334895 ZBTB43O43298 467 aa25.17■■□□□ 1.62
TPM1-204ENST00000334895 SCRN1Q12765 414 aa25.17■■□□□ 1.62
TPM1-204ENST00000334895 MAP3K11Q16584 847 aa25.17■■□□□ 1.62
TPM1-204ENST00000334895 NOL9Q5SY16 702 aaKnown RBP25.17■■□□□ 1.62
TPM1-204ENST00000334895 GTF3C6Q969F1 213 aa25.17■■□□□ 1.62
TPM1-204ENST00000334895 MKL1Q969V6 931 aa25.17■■□□□ 1.62
TPM1-204ENST00000334895 ZNF408Q9H9D4 720 aa25.17■■□□□ 1.62
TPM1-204ENST00000334895 NID2Q14112 1375 aa25.17■■□□□ 1.62
TPM1-204ENST00000334895 A0A1W2PRG0 241 aa25.16■■□□□ 1.62
TPM1-204ENST00000334895 CCT2P78371 535 aaKnown RBP25.16■■□□□ 1.62
TPM1-204ENST00000334895 ATP2B2Q01814 1243 aa25.16■■□□□ 1.62
TPM1-204ENST00000334895 CATIPQ7Z7H3 387 aa25.16■■□□□ 1.62
TPM1-204ENST00000334895 SLKQ9H2G2 1235 aaPredicted RBP25.16■■□□□ 1.62
TPM1-204ENST00000334895 NCOA5Q9HCD5 579 aaKnown RBP25.16■■□□□ 1.62
TPM1-204ENST00000334895 PHIPQ8WWQ0 1821 aa25.16■■□□□ 1.62
TPM1-204ENST00000334895 MAP3K9P80192 1104 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 PPP4R3BQ5MIZ7 849 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 RASGRP2Q7LDG7 609 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 CCDC83Q8IWF9 413 aa25.15■■□□□ 1.62
TPM1-204ENST00000334895 CCDC144CPQ8IYA2 1237 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms