RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 FAM193AP78312 1265 aa13.47□□□□□ -0.25
HDAC6-201ENST00000334136 FILIP1LQ4L180 1135 aa13.47□□□□□ -0.25
HDAC6-201ENST00000334136 PAXBP1Q9Y5B6 917 aa13.47□□□□□ -0.25
HDAC6-201ENST00000334136 PDIA4P13667 645 aaKnown RBP13.46□□□□□ -0.25
HDAC6-201ENST00000334136 CXCL9Q07325 125 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 KIF4BQ2VIQ3 1234 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 TMOD4Q9NZQ9 345 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 CYP2D7A0A087X1C5 515 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 CYP21A2P08686 494 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 DAGLAQ9Y4D2 1042 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 WTIPA6NIX2 430 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-201ENST00000334136 ZNF76P36508 570 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 KLHL10Q6JEL2 608 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 CCDC12Q8WUD4 166 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-201ENST00000334136 CUL5Q93034 780 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 PSMD1Q99460 953 aa13.46□□□□□ -0.25
HDAC6-201ENST00000334136 KDM3BQ7LBC6 1761 aa13.46□□□□□ -0.26
HDAC6-201ENST00000334136 SMTNL1A8MU46 457 aa13.46□□□□□ -0.26
HDAC6-201ENST00000334136 PARP1P09874 1014 aaKnown RBP13.46□□□□□ -0.26
HDAC6-201ENST00000334136 TRAF1Q13077 416 aa13.46□□□□□ -0.26
HDAC6-201ENST00000334136 MIGA2Q7L4E1 593 aa13.46□□□□□ -0.26
HDAC6-201ENST00000334136 FOXP4Q8IVH2 680 aaPredicted RBP13.46□□□□□ -0.26
HDAC6-201ENST00000334136 NLGN2Q8NFZ4 835 aa13.46□□□□□ -0.26
HDAC6-201ENST00000334136 CALCOCO1Q9P1Z2 691 aa13.46□□□□□ -0.26
HDAC6-201ENST00000334136 AGBL3Q8NEM8 1001 aa13.45□□□□□ -0.26
HDAC6-201ENST00000334136 CPLX3Q8WVH0 158 aa13.45□□□□□ -0.26
HDAC6-201ENST00000334136 TM6SF1Q9BZW5 370 aa13.45□□□□□ -0.26
HDAC6-201ENST00000334136 CBFA2T2O43439 604 aa13.45□□□□□ -0.26
HDAC6-201ENST00000334136 TOP1P11387 765 aaKnown RBP13.45□□□□□ -0.26
HDAC6-201ENST00000334136 PCP11498 1178 aaKnown RBP13.45□□□□□ -0.26
HDAC6-201ENST00000334136 RPS12P25398 132 aaKnown RBP13.45□□□□□ -0.26
HDAC6-201ENST00000334136 STX1AQ16623 288 aa13.45□□□□□ -0.26
HDAC6-201ENST00000334136 ABCB5Q2M3G0 1257 aa13.45□□□□□ -0.26
HDAC6-201ENST00000334136 CCDC43Q96MW1 224 aaKnown RBP13.45□□□□□ -0.26
HDAC6-201ENST00000334136 GPCPD1Q9NPB8 672 aa13.45□□□□□ -0.26
HDAC6-201ENST00000334136 SWAP70Q9UH65 585 aa13.45□□□□□ -0.26
HDAC6-201ENST00000334136 ZNF500O60304 480 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-201ENST00000334136 SLC1A4P43007 532 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 VGLL2Q8N8G2 317 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 DNAI1Q9UI46 699 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 ARHGAP29Q52LW3 1261 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 HHIPL2Q6UWX4 724 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 ERCC4Q92889 916 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-201ENST00000334136 DYNLL2Q96FJ2 89 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 RPAP1Q9BWH6 1393 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-201ENST00000334136 SMARCE1Q969G3 411 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 VPS33BQ9H267 617 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 DCP1AQ9NPI6 582 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-201ENST00000334136 HACL1Q9UJ83 578 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-201ENST00000334136 BTAF1O14981 1849 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 ITGB4P16144 1822 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
HDAC6-201ENST00000334136 NEMFO60524 1076 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 IL1R1P14778 569 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 TERF1P54274 439 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 RASEFQ8IZ41 740 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 RFX7Q2KHR2 1363 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 CTAGE5O15320 804 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 ERLIN1O75477 346 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 ICA1Q05084 483 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 PLS1Q14651 629 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 BMS1Q14692 1282 aaKnown RBP13.43□□□□□ -0.26
HDAC6-201ENST00000334136 APOBEC3FQ8IUX4 373 aaKnown RBP13.43□□□□□ -0.26
HDAC6-201ENST00000334136 AOPEPQ8N6M6 819 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 GTPBP4Q9BZE4 634 aaKnown RBP13.43□□□□□ -0.26
HDAC6-201ENST00000334136 AS3MTQ9HBK9 375 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 CCDC194A0A1B0GVG4 234 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 SAMD7Q7Z3H4 446 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 KRT26Q7Z3Y9 468 aa13.43□□□□□ -0.26
HDAC6-201ENST00000334136 BRD1O95696 1058 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 CHGBP05060 677 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 HEATR3Q7Z4Q2 680 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 RRP36Q96EU6 259 aaKnown RBP13.42□□□□□ -0.26
HDAC6-201ENST00000334136 TANGO6Q9C0B7 1094 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 TNKSO95271 1327 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 CRYBG1Q9Y4K1 1723 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 GDF11O95390 407 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 ARMC9Q7Z3E5 817 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 ZSCAN10Q96SZ4 725 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-201ENST00000334136 ALG1Q9BT22 464 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 MYL10Q9BUA6 226 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 SERPINA10Q9UK55 444 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 EIF3JO75822 258 aaKnown RBP13.42□□□□□ -0.26
HDAC6-201ENST00000334136 CYP2D6P10635 497 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 GSDMDP57764 484 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 GNG11P61952 73 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 TIGD1Q96MW7 591 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 TSPYL1Q9H0U9 437 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 MYOZ2Q9NPC6 264 aa13.42□□□□□ -0.26
HDAC6-201ENST00000334136 HDLBPQ00341 1268 aaKnown RBP13.42□□□□□ -0.26
HDAC6-201ENST00000334136 RBM28Q9NW13 759 aaKnown RBP13.42□□□□□ -0.26
HDAC6-201ENST00000334136 GSG1L2A8MUP6 293 aa13.41□□□□□ -0.26
HDAC6-201ENST00000334136 LMAN1P49257 510 aa13.41□□□□□ -0.26
HDAC6-201ENST00000334136 ZSCAN12O43309 604 aa13.41□□□□□ -0.26
HDAC6-201ENST00000334136 CDK8P49336 464 aa13.41□□□□□ -0.26
HDAC6-201ENST00000334136 DHX37Q8IY37 1157 aaKnown RBP13.41□□□□□ -0.26
HDAC6-201ENST00000334136 CCDC47Q96A33 483 aaKnown RBP13.41□□□□□ -0.26
HDAC6-201ENST00000334136 DDNO94850 711 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms