RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 ANKS1AQ92625 1134 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 SMARCE1Q969G3 411 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 NLRP3Q96P20 1036 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 L2HGDHQ9H9P8 463 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 PCDHB6Q9Y5E3 794 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 MYH1P12882 1939 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 FOCADQ5VW36 1801 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 BMP6P22004 513 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 TBX2Q13207 712 aaPredicted RBP12.29□□□□□ -0.44
CCDC172-201ENST00000333254 NR5A1Q13285 461 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 VPS72Q15906 364 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 CCDC178Q5BJE1 867 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 SPTY2D1Q68D10 685 aaPredicted RBP12.29□□□□□ -0.44
CCDC172-201ENST00000333254 CERS3Q8IU89 383 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 CELF1Q92879 486 aaKnown RBP12.29□□□□□ -0.44
CCDC172-201ENST00000333254 ERO1AQ96HE7 468 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 FEZ1Q99689 392 aa12.29□□□□□ -0.44
CCDC172-201ENST00000333254 CGNQ9P2M7 1197 aaKnown RBP12.29□□□□□ -0.44
CCDC172-201ENST00000333254 POLR2DO15514 142 aaKnown RBP12.28□□□□□ -0.44
CCDC172-201ENST00000333254 SERPINC1P01008 464 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 ATP1A3P13637 1013 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 HIBADHP31937 336 aaKnown RBP12.28□□□□□ -0.44
CCDC172-201ENST00000333254 PLCD1P51178 756 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 NPY5RQ15761 445 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 TBC1D9BQ66K14 1250 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 C15orf52Q6ZUT6 534 aaKnown RBP12.28□□□□□ -0.44
CCDC172-201ENST00000333254 NUTM2AQ8IVF1 878 aaPredicted RBP12.28□□□□□ -0.44
CCDC172-201ENST00000333254 OXER1Q8TDS5 423 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 FBXW7Q969H0 707 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 SHISA4Q96DD7 197 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 PPP1R13BQ96KQ4 1090 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
CCDC172-201ENST00000333254 SH3GLB2Q9NR46 395 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 SERTAD1Q9UHV2 236 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 PHLPP2Q6ZVD8 1323 aa12.28□□□□□ -0.44
CCDC172-201ENST00000333254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
CCDC172-201ENST00000333254 GOLGA6L9A6NEM1 432 aa12.27□□□□□ -0.45
CCDC172-201ENST00000333254 SLFN14P0C7P3 912 aa12.27□□□□□ -0.45
CCDC172-201ENST00000333254 DYNLL1P63167 89 aaKnown RBP12.27□□□□□ -0.45
CCDC172-201ENST00000333254 ATP2C1P98194 919 aaPredicted RBP12.27□□□□□ -0.45
CCDC172-201ENST00000333254 MECOMQ03112 1051 aa12.27□□□□□ -0.45
CCDC172-201ENST00000333254 PDE4BQ07343 736 aa12.27□□□□□ -0.45
CCDC172-201ENST00000333254 SEMA3FQ13275 785 aa12.27□□□□□ -0.45
CCDC172-201ENST00000333254 SMAP1Q8IYB5 467 aaPredicted RBP12.27□□□□□ -0.45
CCDC172-201ENST00000333254 CTCFLQ8NI51 663 aaPredicted RBP12.27□□□□□ -0.45
CCDC172-201ENST00000333254 GSDMAQ96QA5 445 aa12.27□□□□□ -0.45
CCDC172-201ENST00000333254 CSRNP2Q9H175 543 aa12.27□□□□□ -0.45
CCDC172-201ENST00000333254 CABP5Q9NP86 173 aa12.27□□□□□ -0.45
CCDC172-201ENST00000333254 USP17L12C9JPN9 530 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 USP17L21D6R901 530 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 ARHGAP6O43182 974 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 KCNQ2O43526 872 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 TOP1P11387 765 aaKnown RBP12.26□□□□□ -0.45
CCDC172-201ENST00000333254 KIF5BP33176 963 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 GRIN1Q05586 938 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 CFAP100Q494V2 611 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 TSC1Q92574 1164 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 SETDB2Q96T68 719 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 FANCLQ9NW38 375 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 IQSEC3Q9UPP2 1182 aaPredicted RBP12.26□□□□□ -0.45
CCDC172-201ENST00000333254 LRRC37AA6NMS7 1700 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 SLU7O95391 586 aaKnown RBP12.26□□□□□ -0.45
CCDC172-201ENST00000333254 PLEKHA8P1O95397 391 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 SCG2P13521 617 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 CALML3P27482 149 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 GTF2E1P29083 439 aaPredicted RBP12.26□□□□□ -0.45
CCDC172-201ENST00000333254 PFKFB3Q16875 520 aaPredicted RBP12.26□□□□□ -0.45
CCDC172-201ENST00000333254 ARL6IP4Q66PJ3 421 aaKnown RBP12.26□□□□□ -0.45
CCDC172-201ENST00000333254 TPTE2Q6XPS3 522 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 DGKHQ86XP1 1220 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 DPF2Q92785 391 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 TCP11L1Q9NUJ3 509 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 VPS54Q9P1Q0 977 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 MKRN1Q9UHC7 482 aaKnown RBP12.26□□□□□ -0.45
CCDC172-201ENST00000333254 LEMD3Q9Y2U8 911 aa12.26□□□□□ -0.45
CCDC172-201ENST00000333254 A0A1B0GTH6 734 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 FOXN1O15353 648 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 ZSCAN12O43309 604 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 STX10O60499 249 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 PRR29P0C7W0 189 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 PPP4CP60510 307 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 ETF1P62495 437 aaKnown RBP12.25□□□□□ -0.45
CCDC172-201ENST00000333254 CCDC93Q567U6 631 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 TTC38Q5R3I4 469 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 GALNT17Q6IS24 598 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 NBPF5PQ86XG9 351 aaPredicted RBP12.25□□□□□ -0.45
CCDC172-201ENST00000333254 TMEM139Q8IV31 216 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 WDR66Q8TBY9 1149 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 SRRTQ9BXP5 876 aaKnown RBP12.25□□□□□ -0.45
CCDC172-201ENST00000333254 INTS13Q9NVM9 706 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 NFE2L3Q9Y4A8 694 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 V9GY48 417 aaPredicted RBP12.25□□□□□ -0.45
CCDC172-201ENST00000333254 UBR3Q6ZT12 1888 aa12.25□□□□□ -0.45
CCDC172-201ENST00000333254 A0A0G2JS52 829 aa12.24□□□□□ -0.45
CCDC172-201ENST00000333254 TM4SF1P30408 202 aa12.24□□□□□ -0.45
CCDC172-201ENST00000333254 GNAQP50148 359 aa12.24□□□□□ -0.45
CCDC172-201ENST00000333254 GSTO1P78417 241 aa12.24□□□□□ -0.45
CCDC172-201ENST00000333254 DPYDQ12882 1025 aa12.24□□□□□ -0.45
CCDC172-201ENST00000333254 SPATA1Q5VX52 437 aa12.24□□□□□ -0.45
CCDC172-201ENST00000333254 SPECC1LQ69YQ0 1117 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms