RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 RASA3Q14644 834 aa27.16■■□□□ 1.94
TSEN54-201ENST00000333213 RRP1BQ14684 758 aaKnown RBP27.16■■□□□ 1.94
TSEN54-201ENST00000333213 CLEC10AQ8IUN9 316 aa27.16■■□□□ 1.94
TSEN54-201ENST00000333213 STX8Q9UNK0 236 aa27.16■■□□□ 1.94
TSEN54-201ENST00000333213 DHX16O60231 1041 aaKnown RBP27.15■■□□□ 1.94
TSEN54-201ENST00000333213 CATIPQ7Z7H3 387 aa27.15■■□□□ 1.94
TSEN54-201ENST00000333213 TMEM47Q9BQJ4 181 aa27.15■■□□□ 1.94
TSEN54-201ENST00000333213 RTN1Q16799 776 aa27.14■■□□□ 1.94
TSEN54-201ENST00000333213 L1TD1Q5T7N2 865 aaKnown RBP27.14■■□□□ 1.94
TSEN54-201ENST00000333213 FOXD4L5Q5VV16 416 aaPredicted RBP27.14■■□□□ 1.94
TSEN54-201ENST00000333213 FOXD4L4Q8WXT5 416 aaPredicted RBP27.14■■□□□ 1.94
TSEN54-201ENST00000333213 GREB1LQ9C091 1923 aaPredicted RBP27.14■■□□□ 1.94
TSEN54-201ENST00000333213 CPLX1O14810 134 aa27.14■■□□□ 1.93
TSEN54-201ENST00000333213 STX6O43752 255 aa27.14■■□□□ 1.93
TSEN54-201ENST00000333213 CMTR1Q8N1G2 835 aaKnown RBP27.14■■□□□ 1.93
TSEN54-201ENST00000333213 TEPSINQ96N21 525 aa27.14■■□□□ 1.93
TSEN54-201ENST00000333213 MTMR4Q9NYA4 1195 aa27.14■■□□□ 1.93
TSEN54-201ENST00000333213 JAG1P78504 1218 aa27.13■■□□□ 1.93
TSEN54-201ENST00000333213 HMGN5P82970 282 aaKnown RBP27.13■■□□□ 1.93
TSEN54-201ENST00000333213 CERKLQ49MI3 558 aaPredicted RBP27.13■■□□□ 1.93
TSEN54-201ENST00000333213 CCDC178Q5BJE1 867 aa27.13■■□□□ 1.93
TSEN54-201ENST00000333213 LARP1BQ659C4 914 aaKnown RBP27.13■■□□□ 1.93
TSEN54-201ENST00000333213 PNMA1Q8ND90 353 aa27.13■■□□□ 1.93
TSEN54-201ENST00000333213 PHKBQ93100 1093 aa27.13■■□□□ 1.93
TSEN54-201ENST00000333213 DDAH1O94760 285 aa27.12■■□□□ 1.93
TSEN54-201ENST00000333213 CHMP4CQ96CF2 233 aa27.12■■□□□ 1.93
TSEN54-201ENST00000333213 CCDC17Q96LX7 622 aa27.12■■□□□ 1.93
TSEN54-201ENST00000333213 KAT14Q9H8E8 782 aa27.12■■□□□ 1.93
TSEN54-201ENST00000333213 TAOK2Q9UL54 1235 aa27.12■■□□□ 1.93
TSEN54-201ENST00000333213 MTMR6Q9Y217 621 aa27.12■■□□□ 1.93
TSEN54-201ENST00000333213 UBE2Q2LH0YL09 131 aa27.12■■□□□ 1.93
TSEN54-201ENST00000333213 GRIN3BO60391 1043 aa27.12■■□□□ 1.93
TSEN54-201ENST00000333213 HERC5Q9UII4 1024 aaKnown RBP27.12■■□□□ 1.93
TSEN54-201ENST00000333213 TRIM34Q9BYJ4 488 aa27.11■■□□□ 1.93
TSEN54-201ENST00000333213 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.11■■□□□ 1.93
TSEN54-201ENST00000333213 MPHOSPH10O00566 681 aaKnown RBP27.1■■□□□ 1.93
TSEN54-201ENST00000333213 ANGEL2Q5VTE6 544 aaKnown RBP27.1■■□□□ 1.93
TSEN54-201ENST00000333213 MIGA2Q7L4E1 593 aa27.1■■□□□ 1.93
TSEN54-201ENST00000333213 RASGRP2Q7LDG7 609 aa27.1■■□□□ 1.93
TSEN54-201ENST00000333213 NBPF11Q86T75 865 aa27.1■■□□□ 1.93
TSEN54-201ENST00000333213 GDF11O95390 407 aa27.1■■□□□ 1.93
TSEN54-201ENST00000333213 IFNAR1P17181 557 aa27.1■■□□□ 1.93
TSEN54-201ENST00000333213 GUCY1A2P33402 732 aa27.1■■□□□ 1.93
TSEN54-201ENST00000333213 TNNI2P48788 182 aa27.1■■□□□ 1.93
TSEN54-201ENST00000333213 FAM184AQ8NB25 1140 aa27.1■■□□□ 1.93
TSEN54-201ENST00000333213 DEFB129Q9H1M3 183 aa27.1■■□□□ 1.93
TSEN54-201ENST00000333213 ORC3Q9UBD5 711 aaPredicted RBP27.1■■□□□ 1.93
TSEN54-201ENST00000333213 CALM1P0DP23 149 aa27.09■■□□□ 1.93
TSEN54-201ENST00000333213 CALM2P0DP24 149 aa27.09■■□□□ 1.93
TSEN54-201ENST00000333213 CALM3P0DP25 149 aa27.09■■□□□ 1.93
TSEN54-201ENST00000333213 MAP3K10Q02779 954 aa27.09■■□□□ 1.93
TSEN54-201ENST00000333213 TNFAIP1Q13829 316 aa27.09■■□□□ 1.93
TSEN54-201ENST00000333213 CCDC82Q8N4S0 544 aa27.09■■□□□ 1.93
TSEN54-201ENST00000333213 CHAMP1Q96JM3 812 aa27.09■■□□□ 1.93
TSEN54-201ENST00000333213 WDR33Q9C0J8 1336 aaKnown RBP27.09■■□□□ 1.93
TSEN54-201ENST00000333213 TBC1D12O60347 775 aa27.08■■□□□ 1.93
TSEN54-201ENST00000333213 PLEKHA8P1O95397 391 aa27.08■■□□□ 1.93
TSEN54-201ENST00000333213 FUT2Q10981 343 aa27.08■■□□□ 1.93
TSEN54-201ENST00000333213 CDC37L1Q7L3B6 337 aa27.08■■□□□ 1.93
TSEN54-201ENST00000333213 ZSCAN22P10073 491 aaPredicted RBP27.08■■□□□ 1.93
TSEN54-201ENST00000333213 PPP2R5BQ15173 497 aa27.08■■□□□ 1.93
TSEN54-201ENST00000333213 CCDC196A0A1B0GTZ2 297 aa27.07■■□□□ 1.92
TSEN54-201ENST00000333213 TOP1P11387 765 aaKnown RBP27.07■■□□□ 1.92
TSEN54-201ENST00000333213 PDCP20941 246 aa27.07■■□□□ 1.92
TSEN54-201ENST00000333213 MCM4P33991 863 aa27.07■■□□□ 1.92
TSEN54-201ENST00000333213 SIAH1Q8IUQ4 282 aa27.07■■□□□ 1.92
TSEN54-201ENST00000333213 AIFM3Q96NN9 605 aa27.07■■□□□ 1.92
TSEN54-201ENST00000333213 GGA3Q9NZ52 723 aa27.07■■□□□ 1.92
TSEN54-201ENST00000333213 VPS37CA5D8V6 355 aaPredicted RBP27.06■■□□□ 1.92
TSEN54-201ENST00000333213 CDKL5O76039 1030 aa27.06■■□□□ 1.92
TSEN54-201ENST00000333213 SEPT2Q15019 361 aa27.06■■□□□ 1.92
TSEN54-201ENST00000333213 CPLX2Q6PUV4 134 aaKnown RBP27.06■■□□□ 1.92
TSEN54-201ENST00000333213 ADARB2Q9NS39 739 aaKnown RBP27.06■■□□□ 1.92
TSEN54-201ENST00000333213 GJB4Q9NTQ9 266 aa27.06■■□□□ 1.92
TSEN54-201ENST00000333213 CLIP2Q9UDT6 1046 aa27.06■■□□□ 1.92
TSEN54-201ENST00000333213 TTLL1O95922 423 aa27.06■■□□□ 1.92
TSEN54-201ENST00000333213 FOSBP53539 338 aa27.06■■□□□ 1.92
TSEN54-201ENST00000333213 ABCB5Q2M3G0 1257 aa27.06■■□□□ 1.92
TSEN54-201ENST00000333213 DPY19L2Q6NUT2 758 aa27.06■■□□□ 1.92
TSEN54-201ENST00000333213 STAG2Q8N3U4 1231 aa27.06■■□□□ 1.92
TSEN54-201ENST00000333213 MTMR7Q9Y216 660 aa27.06■■□□□ 1.92
TSEN54-201ENST00000333213 FMNL1O95466 1100 aaPredicted RBP27.05■■□□□ 1.92
TSEN54-201ENST00000333213 GH2P01242 217 aa27.05■■□□□ 1.92
TSEN54-201ENST00000333213 LMOD1P29536 600 aaPredicted RBP27.05■■□□□ 1.92
TSEN54-201ENST00000333213 TMTC3Q6ZXV5 915 aa27.05■■□□□ 1.92
TSEN54-201ENST00000333213 LRRC47Q8N1G4 583 aaKnown RBP27.05■■□□□ 1.92
TSEN54-201ENST00000333213 SRBD1Q8N5C6 995 aaKnown RBP27.05■■□□□ 1.92
TSEN54-201ENST00000333213 CTCFLQ8NI51 663 aaPredicted RBP27.05■■□□□ 1.92
TSEN54-201ENST00000333213 L3MBTL3Q96JM7 780 aaPredicted RBP27.05■■□□□ 1.92
TSEN54-201ENST00000333213 MAP3K14Q99558 947 aa27.05■■□□□ 1.92
TSEN54-201ENST00000333213 SLC26A6Q9BXS9 759 aa27.05■■□□□ 1.92
TSEN54-201ENST00000333213 RBM28Q9NW13 759 aaKnown RBP27.05■■□□□ 1.92
TSEN54-201ENST00000333213 MAD2L2Q9UI95 211 aa27.05■■□□□ 1.92
TSEN54-201ENST00000333213 GRM4Q14833 912 aa27.04■■□□□ 1.92
TSEN54-201ENST00000333213 CLEC17AQ6ZS10 378 aa27.04■■□□□ 1.92
TSEN54-201ENST00000333213 TMEM179Q6ZVK1 233 aa27.04■■□□□ 1.92
TSEN54-201ENST00000333213 FAM43AQ8N2R8 423 aa27.04■■□□□ 1.92
TSEN54-201ENST00000333213 F13A1P00488 732 aa27.04■■□□□ 1.92
TSEN54-201ENST00000333213 NBPF12Q5TAG4 269 aaPredicted RBP27.04■■□□□ 1.92
TSEN54-201ENST00000333213 PRAMEF18Q5VWM3 479 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms