RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 TUBB2BQ9BVA1 445 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 ADD3Q9UEY8 706 aaKnown RBP23.15■■□□□ 1.3
CMTM4-201ENST00000330687 CHD1O14646 1710 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 HSF2BPO75031 334 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 BRD2P25440 801 aaKnown RBP23.15■■□□□ 1.3
CMTM4-201ENST00000330687 ANTXR2P58335 489 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 TUBB4BP68371 445 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 SF3B2Q13435 895 aaKnown RBP23.15■■□□□ 1.3
CMTM4-201ENST00000330687 SPATA1Q5VX52 437 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 CSRNP2Q9H175 543 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 NDUFA10O95299 355 aa23.15■■□□□ 1.3
CMTM4-201ENST00000330687 DMGDHQ9UI17 866 aaKnown RBP23.15■■□□□ 1.3
CMTM4-201ENST00000330687 PEX19P40855 299 aa23.14■■□□□ 1.3
CMTM4-201ENST00000330687 MORC3Q14149 939 aa23.14■■□□□ 1.3
CMTM4-201ENST00000330687 AGXT2Q9BYV1 514 aa23.14■■□□□ 1.3
CMTM4-201ENST00000330687 BCCIPQ9P287 314 aaKnown RBP eCLIP23.14■■□□□ 1.3
CMTM4-201ENST00000330687 PPP1R12BO60237 982 aaPredicted RBP23.14■■□□□ 1.29
CMTM4-201ENST00000330687 AARSP49588 968 aaKnown RBP eCLIP23.14■■□□□ 1.29
CMTM4-201ENST00000330687 GUCY2FP51841 1108 aa23.14■■□□□ 1.29
CMTM4-201ENST00000330687 CCNI2Q6ZMN8 369 aaPredicted RBP23.14■■□□□ 1.29
CMTM4-201ENST00000330687 B4GALNT4Q76KP1 1039 aa23.14■■□□□ 1.29
CMTM4-201ENST00000330687 NRKQ7Z2Y5 1582 aa23.14■■□□□ 1.29
CMTM4-201ENST00000330687 GOLGA6L7A0A1B0GV03 622 aa23.14■■□□□ 1.29
CMTM4-201ENST00000330687 PDE2AO00408 941 aaPredicted RBP23.14■■□□□ 1.29
CMTM4-201ENST00000330687 ZBTB43O43298 467 aa23.14■■□□□ 1.29
CMTM4-201ENST00000330687 ZKSCAN4Q969J2 545 aaPredicted RBP23.14■■□□□ 1.29
CMTM4-201ENST00000330687 VIPAS39Q9H9C1 493 aa23.14■■□□□ 1.29
CMTM4-201ENST00000330687 ESYT3A0FGR9 886 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 E7EVH7 732 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 KRT31Q15323 416 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 NAIF1Q69YI7 327 aaPredicted RBP23.13■■□□□ 1.29
CMTM4-201ENST00000330687 TBC1D31Q96DN5 1066 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 LRRC1Q9BTT6 524 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 MYO1BO43795 1136 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 CDKL5O76039 1030 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 RASSF8Q8NHQ8 419 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 MAP3K14Q99558 947 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 PDHBP11177 359 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 GBP2P32456 591 aaPredicted RBP23.13■■□□□ 1.29
CMTM4-201ENST00000330687 GUCY1A2P33402 732 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 LRRC24Q50LG9 513 aa23.13■■□□□ 1.29
CMTM4-201ENST00000330687 SH3TC1Q8TE82 1336 aa23.12■■□□□ 1.29
CMTM4-201ENST00000330687 USP6P35125 1406 aa23.12■■□□□ 1.29
CMTM4-201ENST00000330687 GPTP24298 496 aa23.12■■□□□ 1.29
CMTM4-201ENST00000330687 HDGFP51858 240 aaKnown RBP23.12■■□□□ 1.29
CMTM4-201ENST00000330687 RBM33Q96EV2 1170 aaKnown RBP23.12■■□□□ 1.29
CMTM4-201ENST00000330687 OVOS2A0A0J9YW53 1432 aa23.12■■□□□ 1.29
CMTM4-201ENST00000330687 OVOS2Q6IE36 1432 aa23.12■■□□□ 1.29
CMTM4-201ENST00000330687 CTAGE1Q96RT6 745 aa23.12■■□□□ 1.29
CMTM4-201ENST00000330687 KLC4Q9NSK0 619 aa23.12■■□□□ 1.29
CMTM4-201ENST00000330687 MEFVO15553 781 aaPredicted RBP23.11■■□□□ 1.29
CMTM4-201ENST00000330687 KIF1CO43896 1103 aaKnown RBP23.11■■□□□ 1.29
CMTM4-201ENST00000330687 OPA1O60313 960 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 CKAP4Q07065 602 aaKnown RBP23.11■■□□□ 1.29
CMTM4-201ENST00000330687 NNTQ13423 1086 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 CCDC40Q4G0X9 1142 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 TMEM67Q5HYA8 995 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 ANKRD13DQ6ZTN6 518 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 MAATS1Q7Z4T9 603 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 IQCA1Q86XH1 822 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 ANKRD13CQ8N6S4 541 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 PUS7LQ9H0K6 701 aaKnown RBP23.11■■□□□ 1.29
CMTM4-201ENST00000330687 ZMYM6O95789 1325 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 ROBO2Q9HCK4 1378 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 CHUKO15111 745 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 ERCC3P19447 782 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 TRHP20396 242 aaPredicted RBP23.11■■□□□ 1.29
CMTM4-201ENST00000330687 AMPD2Q01433 879 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 SSRP1Q08945 709 aaKnown RBP23.11■■□□□ 1.29
CMTM4-201ENST00000330687 CCDC96Q2M329 555 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 NOSTRINQ8IVI9 506 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 NKX2-3Q8TAU0 364 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 COPRSQ9NQ92 184 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 ANGEL1Q9UNK9 670 aaKnown RBP23.11■■□□□ 1.29
CMTM4-201ENST00000330687 DDX21Q9NR30 783 aaKnown RBP eCLIP23.11■■□□□ 1.29
CMTM4-201ENST00000330687 VPS54Q9P1Q0 977 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 LUC7L2Q9Y383 392 aaKnown RBP23.11■■□□□ 1.29
CMTM4-201ENST00000330687 DLC1Q96QB1 1528 aa23.11■■□□□ 1.29
CMTM4-201ENST00000330687 TRAPPC11Q7Z392 1133 aa23.1■■□□□ 1.29
CMTM4-201ENST00000330687 MDM2Q00987 491 aaPredicted RBP23.1■■□□□ 1.29
CMTM4-201ENST00000330687 NBPF14Q5TI25 921 aa23.1■■□□□ 1.29
CMTM4-201ENST00000330687 FAM184BQ9ULE4 1060 aa23.1■■□□□ 1.29
CMTM4-201ENST00000330687 BIRC2Q13490 618 aa23.1■■□□□ 1.29
CMTM4-201ENST00000330687 PRPF38AQ8NAV1 312 aaKnown RBP23.1■■□□□ 1.29
CMTM4-201ENST00000330687 TSEN2Q8NCE0 465 aaKnown RBP23.1■■□□□ 1.29
CMTM4-201ENST00000330687 FAM205CA6NFA0 338 aa23.09■■□□□ 1.29
CMTM4-201ENST00000330687 IDH1O75874 414 aaKnown RBP23.09■■□□□ 1.29
CMTM4-201ENST00000330687 LACRTQ9GZZ8 138 aa23.09■■□□□ 1.29
CMTM4-201ENST00000330687 CLTCQ00610 1675 aaKnown RBP23.09■■□□□ 1.29
CMTM4-201ENST00000330687 ARAP3Q8WWN8 1544 aa23.09■■□□□ 1.29
CMTM4-201ENST00000330687 IFIT3O14879 490 aaKnown RBP23.09■■□□□ 1.29
CMTM4-201ENST00000330687 KRT86O43790 486 aa23.09■■□□□ 1.29
CMTM4-201ENST00000330687 CYB5R4Q7L1T6 521 aa23.09■■□□□ 1.29
CMTM4-201ENST00000330687 BABAM1Q9NWV8 329 aa23.09■■□□□ 1.29
CMTM4-201ENST00000330687 TTC26A0AVF1 554 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 HOXB7P09629 217 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 SATB1Q01826 763 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 APOA5Q6Q788 366 aa23.08■■□□□ 1.29
CMTM4-201ENST00000330687 MB21D2Q8IYB1 491 aaPredicted RBP23.08■■□□□ 1.29
CMTM4-201ENST00000330687 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms