RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 URI1O94763 535 aaPredicted RBP17.55■□□□□ 0.4
BRCC3-201ENST00000330045 CYP7A1P22680 504 aa17.55■□□□□ 0.4
BRCC3-201ENST00000330045 TRMT44Q8IYL2 757 aaKnown RBP17.55■□□□□ 0.4
BRCC3-201ENST00000330045 RNF26Q9BY78 433 aaPredicted RBP17.55■□□□□ 0.4
BRCC3-201ENST00000330045 VWA3AA6NCI4 1184 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 MINDY4BA8MYZ0 360 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 ONECUT3O60422 494 aaPredicted RBP17.54■□□□□ 0.4
BRCC3-201ENST00000330045 STX10O60499 249 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 AKAP17AQ02040 695 aaKnown RBP17.54■□□□□ 0.4
BRCC3-201ENST00000330045 ARHGAP29Q52LW3 1261 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 USP49Q70CQ1 688 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 ESR2Q92731 530 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 FANCGO15287 622 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 XBP1P17861 261 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 SEC23AQ15436 765 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 TBC1D9BQ66K14 1250 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 TC2NQ8N9U0 490 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 MNS1Q8NEH6 495 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 SPATA20Q8TB22 786 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 SDR42E1Q8WUS8 393 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 UBXN4Q92575 508 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 LRRC4BQ9NT99 713 aa17.54■□□□□ 0.4
BRCC3-201ENST00000330045 TNKSO95271 1327 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 NHSQ6T4R5 1651 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 ADKP55263 362 aaKnown RBP17.53■□□□□ 0.4
BRCC3-201ENST00000330045 CHRNDQ07001 517 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 GOLGA6L9A6NEM1 432 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 PLCD1P51178 756 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 CLCN6P51797 869 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 BMS1Q14692 1282 aaKnown RBP17.53■□□□□ 0.4
BRCC3-201ENST00000330045 ERFEQ4G0M1 354 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 PARP10Q53GL7 1025 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 ADGRA1Q86SQ6 560 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 FAM177A1Q8N128 213 aaPredicted RBP17.53■□□□□ 0.4
BRCC3-201ENST00000330045 MED15Q96RN5 788 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 SAMSN1Q9NSI8 373 aaKnown RBP17.53■□□□□ 0.4
BRCC3-201ENST00000330045 ANAPC4Q9UJX5 808 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 PARP3Q9Y6F1 533 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 LAMB2P55268 1798 aa17.53■□□□□ 0.4
BRCC3-201ENST00000330045 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.4
BRCC3-201ENST00000330045 TRIM75PA6NK02 468 aa17.52■□□□□ 0.4
BRCC3-201ENST00000330045 ERCC5P28715 1186 aaPredicted RBP17.52■□□□□ 0.4
BRCC3-201ENST00000330045 CCDC34Q96HJ3 373 aa17.52■□□□□ 0.4
BRCC3-201ENST00000330045 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.4
BRCC3-201ENST00000330045 ABCF2Q9UG63 623 aa17.52■□□□□ 0.4
BRCC3-201ENST00000330045 IQSEC3Q9UPP2 1182 aaPredicted RBP17.52■□□□□ 0.4
BRCC3-201ENST00000330045 CNTNAP4Q9C0A0 1308 aa17.52■□□□□ 0.39
BRCC3-201ENST00000330045 MAGEB6P1A0A0J9YX57 407 aa17.52■□□□□ 0.39
BRCC3-201ENST00000330045 SLFN14P0C7P3 912 aa17.52■□□□□ 0.39
BRCC3-201ENST00000330045 ZNF771Q7L3S4 317 aaPredicted RBP17.52■□□□□ 0.39
BRCC3-201ENST00000330045 DHX58Q96C10 678 aa17.52■□□□□ 0.39
BRCC3-201ENST00000330045 SHISA4Q96DD7 197 aa17.52■□□□□ 0.39
BRCC3-201ENST00000330045 RAI14Q9P0K7 980 aa17.52■□□□□ 0.39
BRCC3-201ENST00000330045 VPS54Q9P1Q0 977 aa17.52■□□□□ 0.39
BRCC3-201ENST00000330045 MYH6P13533 1939 aa17.51■□□□□ 0.39
BRCC3-201ENST00000330045 SBF2Q86WG5 1849 aa17.51■□□□□ 0.39
BRCC3-201ENST00000330045 WTIPA6NIX2 430 aaPredicted RBP17.51■□□□□ 0.39
BRCC3-201ENST00000330045 NR1I3Q14994 352 aa17.51■□□□□ 0.39
BRCC3-201ENST00000330045 CARD6Q9BX69 1037 aa17.51■□□□□ 0.39
BRCC3-201ENST00000330045 FAM205CA6NFA0 338 aa17.5■□□□□ 0.39
BRCC3-201ENST00000330045 KRT2P35908 639 aa17.5■□□□□ 0.39
BRCC3-201ENST00000330045 PKN1Q16512 942 aa17.5■□□□□ 0.39
BRCC3-201ENST00000330045 PHF20Q9BVI0 1012 aa17.5■□□□□ 0.39
BRCC3-201ENST00000330045 EFCAB8A8MWE9 144 aa17.5■□□□□ 0.39
BRCC3-201ENST00000330045 TADA3O75528 432 aa17.5■□□□□ 0.39
BRCC3-201ENST00000330045 CASQ1P31415 396 aa17.5■□□□□ 0.39
BRCC3-201ENST00000330045 GNG11P61952 73 aa17.5■□□□□ 0.39
BRCC3-201ENST00000330045 TOGARAM2Q6ZUX3 1019 aa17.5■□□□□ 0.39
BRCC3-201ENST00000330045 ENAHQ8N8S7 591 aaPredicted RBP17.5■□□□□ 0.39
BRCC3-201ENST00000330045 EPSTI1Q96J88 318 aa17.5■□□□□ 0.39
BRCC3-201ENST00000330045 ZSCAN10Q96SZ4 725 aaPredicted RBP17.5■□□□□ 0.39
BRCC3-201ENST00000330045 ARGLU1Q9NWB6 273 aaPredicted RBP17.5■□□□□ 0.39
BRCC3-201ENST00000330045 A0A087X0B3 334 aa17.49■□□□□ 0.39
BRCC3-201ENST00000330045 A0A1B0GTH6 734 aa17.49■□□□□ 0.39
BRCC3-201ENST00000330045 SMIM22K7EJ46 135 aa17.49■□□□□ 0.39
BRCC3-201ENST00000330045 TERF2Q15554 542 aa17.49■□□□□ 0.39
BRCC3-201ENST00000330045 EARS2Q5JPH6 523 aaKnown RBP17.49■□□□□ 0.39
BRCC3-201ENST00000330045 CT47A1Q5JQC4 288 aaPredicted RBP17.49■□□□□ 0.39
BRCC3-201ENST00000330045 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
BRCC3-201ENST00000330045 TAF1P21675 1872 aa17.49■□□□□ 0.39
BRCC3-201ENST00000330045 PRPF3O43395 683 aaKnown RBP17.49■□□□□ 0.39
BRCC3-201ENST00000330045 RPS6KA4O75676 772 aa17.49■□□□□ 0.39
BRCC3-201ENST00000330045 AFMP43652 599 aa17.49■□□□□ 0.39
BRCC3-201ENST00000330045 FUT2Q10981 343 aa17.49■□□□□ 0.39
BRCC3-201ENST00000330045 CATIPQ7Z7H3 387 aa17.49■□□□□ 0.39
BRCC3-201ENST00000330045 PRDM1O75626 825 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 TPM1P09493 284 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 IFIT1BQ5T764 474 aaKnown RBP17.48■□□□□ 0.39
BRCC3-201ENST00000330045 SPATA1Q5VX52 437 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 WDR24Q96S15 920 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 FHOD1Q9Y613 1164 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 V9GY48 417 aaPredicted RBP17.48■□□□□ 0.39
BRCC3-201ENST00000330045 hCG_1642624A0A1W2PR95 340 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 BMP15O95972 392 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 SH3RF1Q7Z6J0 888 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 SLC51AQ86UW1 340 aa17.48■□□□□ 0.39
BRCC3-201ENST00000330045 SYMPKQ92797 1274 aaKnown RBP17.48■□□□□ 0.39
BRCC3-201ENST00000330045 FERMT2Q96AC1 680 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms