RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 SLC9C2Q5TAH2 1124 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 TATDN1Q6P1N9 297 aa28.26■■■□□ 2.11
TMEM54-201ENST00000329151 RPAP2Q8IXW5 612 aaPredicted RBP28.26■■■□□ 2.11
TMEM54-201ENST00000329151 ZKSCAN1P17029 563 aaPredicted RBP28.25■■■□□ 2.11
TMEM54-201ENST00000329151 WDR78Q5VTH9 848 aa28.25■■■□□ 2.11
TMEM54-201ENST00000329151 TXNRD2Q9NNW7 524 aa28.25■■■□□ 2.11
TMEM54-201ENST00000329151 EMILIN3Q9NT22 766 aa28.25■■■□□ 2.11
TMEM54-201ENST00000329151 PLXNB2O15031 1838 aa28.25■■■□□ 2.11
TMEM54-201ENST00000329151 RGS2P41220 211 aa28.24■■■□□ 2.11
TMEM54-201ENST00000329151 RBM27Q9P2N5 1060 aaKnown RBP28.24■■■□□ 2.11
TMEM54-201ENST00000329151 RBPJLQ9UBG7 517 aa28.24■■■□□ 2.11
TMEM54-201ENST00000329151 GOLIM4O00461 696 aa28.23■■■□□ 2.11
TMEM54-201ENST00000329151 MPHOSPH10O00566 681 aaKnown RBP28.23■■■□□ 2.11
TMEM54-201ENST00000329151 XRCC5P13010 732 aaKnown RBP28.23■■■□□ 2.11
TMEM54-201ENST00000329151 PDE6AP16499 860 aa28.23■■■□□ 2.11
TMEM54-201ENST00000329151 PLEKHH3Q7Z736 793 aa28.23■■■□□ 2.11
TMEM54-201ENST00000329151 TRIB2Q92519 343 aa28.23■■■□□ 2.11
TMEM54-201ENST00000329151 NBPF3Q9H094 633 aa28.23■■■□□ 2.11
TMEM54-201ENST00000329151 MCM9Q9NXL9 1143 aa28.23■■■□□ 2.11
TMEM54-201ENST00000329151 MYH8P13535 1937 aa28.23■■■□□ 2.11
TMEM54-201ENST00000329151 PRKAR2AP13861 404 aaKnown RBP28.22■■■□□ 2.11
TMEM54-201ENST00000329151 GPR142Q7Z601 462 aa28.22■■■□□ 2.11
TMEM54-201ENST00000329151 C12orf42Q96LP6 360 aa28.22■■■□□ 2.11
TMEM54-201ENST00000329151 RABGAP1Q9Y3P9 1069 aa28.22■■■□□ 2.11
TMEM54-201ENST00000329151 PEX10O60683 326 aa28.21■■■□□ 2.11
TMEM54-201ENST00000329151 RAB11FIP3O75154 756 aa28.21■■■□□ 2.11
TMEM54-201ENST00000329151 TRIM32Q13049 653 aa28.21■■■□□ 2.11
TMEM54-201ENST00000329151 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.21■■■□□ 2.11
TMEM54-201ENST00000329151 RIOK1Q9BRS2 568 aaKnown RBP28.21■■■□□ 2.11
TMEM54-201ENST00000329151 KIAA1683Q9H0B3 1180 aa28.21■■■□□ 2.11
TMEM54-201ENST00000329151 COG6Q9Y2V7 657 aa28.21■■■□□ 2.11
TMEM54-201ENST00000329151 ZNF532Q9HCE3 1301 aa28.2■■■□□ 2.11
TMEM54-201ENST00000329151 AMOTL1Q8IY63 956 aa28.2■■■□□ 2.1
TMEM54-201ENST00000329151 IVNS1ABPQ9Y6Y0 642 aa28.2■■■□□ 2.1
TMEM54-201ENST00000329151 PLCD1P51178 756 aa28.19■■■□□ 2.1
TMEM54-201ENST00000329151 Q3C1V9 767 aa28.19■■■□□ 2.1
TMEM54-201ENST00000329151 DIS3LQ8TF46 1054 aaKnown RBP28.19■■■□□ 2.1
TMEM54-201ENST00000329151 APBA2Q99767 749 aa28.19■■■□□ 2.1
TMEM54-201ENST00000329151 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.19■■■□□ 2.1
TMEM54-201ENST00000329151 PORCNQ9H237 461 aa28.19■■■□□ 2.1
TMEM54-201ENST00000329151 VCAM1P19320 739 aa28.18■■■□□ 2.1
TMEM54-201ENST00000329151 DDRGK1Q96HY6 314 aa28.18■■■□□ 2.1
TMEM54-201ENST00000329151 C11orf49Q9H6J7 331 aa28.18■■■□□ 2.1
TMEM54-201ENST00000329151 DDX60LQ5H9U9 1706 aaKnown RBP28.18■■■□□ 2.1
TMEM54-201ENST00000329151 SHMT1P34896 483 aa28.17■■■□□ 2.1
TMEM54-201ENST00000329151 CATSPERGQ6ZRH7 1159 aa28.17■■■□□ 2.1
TMEM54-201ENST00000329151 C7orf61Q8IZ16 206 aa28.17■■■□□ 2.1
TMEM54-201ENST00000329151 ACER1Q8TDN7 264 aa28.17■■■□□ 2.1
TMEM54-201ENST00000329151 RPAP3Q9H6T3 665 aaPredicted RBP28.17■■■□□ 2.1
TMEM54-201ENST00000329151 ALPK3Q96L96 1907 aa28.16■■■□□ 2.1
TMEM54-201ENST00000329151 PAG1Q9NWQ8 432 aa28.16■■■□□ 2.1
TMEM54-201ENST00000329151 MAP2K5Q13163 448 aa28.15■■■□□ 2.1
TMEM54-201ENST00000329151 SEPT2Q15019 361 aa28.15■■■□□ 2.1
TMEM54-201ENST00000329151 MAP3K21Q5TCX8 1036 aa28.15■■■□□ 2.1
TMEM54-201ENST00000329151 MFSD14CQ5VZR4 134 aa28.15■■■□□ 2.1
TMEM54-201ENST00000329151 SDR42E1Q8WUS8 393 aa28.15■■■□□ 2.1
TMEM54-201ENST00000329151 SWAP70Q9UH65 585 aa28.15■■■□□ 2.1
TMEM54-201ENST00000329151 OGDHLQ9ULD0 1010 aa28.15■■■□□ 2.1
TMEM54-201ENST00000329151 A0A1W2PPC1 479 aa28.14■■■□□ 2.1
TMEM54-201ENST00000329151 CACNB2Q08289 660 aaPredicted RBP28.14■■■□□ 2.1
TMEM54-201ENST00000329151 MORN1Q5T089 497 aa28.14■■■□□ 2.1
TMEM54-201ENST00000329151 EDC3Q96F86 508 aaKnown RBP28.14■■■□□ 2.1
TMEM54-201ENST00000329151 TANGO6Q9C0B7 1094 aa28.14■■■□□ 2.1
TMEM54-201ENST00000329151 BOLA2Q9H3K6 86 aa28.14■■■□□ 2.1
TMEM54-201ENST00000329151 ZBTB40Q9NUA8 1239 aa28.14■■■□□ 2.1
TMEM54-201ENST00000329151 LCORLQ8N3X6 602 aa28.13■■■□□ 2.09
TMEM54-201ENST00000329151 SH2D4AQ9H788 454 aa28.13■■■□□ 2.09
TMEM54-201ENST00000329151 ARMT1Q9H993 441 aa28.13■■■□□ 2.09
TMEM54-201ENST00000329151 DCP1AQ9NPI6 582 aaPredicted RBP28.13■■■□□ 2.09
TMEM54-201ENST00000329151 MYH7P12883 1935 aa28.13■■■□□ 2.09
TMEM54-201ENST00000329151 RANBP2P49792 3224 aaKnown RBP28.13■■■□□ 2.09
TMEM54-201ENST00000329151 SLC15A5A6NIM6 579 aa28.12■■■□□ 2.09
TMEM54-201ENST00000329151 CCL14Q16627 93 aa28.12■■■□□ 2.09
TMEM54-201ENST00000329151 TMEM179Q6ZVK1 233 aa28.12■■■□□ 2.09
TMEM54-201ENST00000329151 ARHGEF10LQ9HCE6 1279 aa28.12■■■□□ 2.09
TMEM54-201ENST00000329151 HOXC10Q9NYD6 342 aa28.12■■■□□ 2.09
TMEM54-201ENST00000329151 STAP2Q9UGK3 403 aa28.12■■■□□ 2.09
TMEM54-201ENST00000329151 RCAN3Q9UKA8 241 aa28.12■■■□□ 2.09
TMEM54-201ENST00000329151 BAZ2AQ9UIF9 1905 aaKnown RBP28.12■■■□□ 2.09
TMEM54-201ENST00000329151 ATP2B2Q01814 1243 aa28.11■■■□□ 2.09
TMEM54-201ENST00000329151 GABPAQ06546 454 aa28.11■■■□□ 2.09
TMEM54-201ENST00000329151 USP6NLQ92738 828 aa28.11■■■□□ 2.09
TMEM54-201ENST00000329151 ZMYND8Q9ULU4 1186 aaPredicted RBP28.11■■■□□ 2.09
TMEM54-201ENST00000329151 MBD4O95243 580 aa28.1■■■□□ 2.09
TMEM54-201ENST00000329151 COG2Q14746 738 aa28.1■■■□□ 2.09
TMEM54-201ENST00000329151 ZSCAN25Q6NSZ9 544 aa28.1■■■□□ 2.09
TMEM54-201ENST00000329151 LBX2Q6XYB7 198 aa28.1■■■□□ 2.09
TMEM54-201ENST00000329151 ATP8A2Q9NTI2 1148 aa28.1■■■□□ 2.09
TMEM54-201ENST00000329151 TCRBV5S4A2TA0A5A2 114 aa28.09■■■□□ 2.09
TMEM54-201ENST00000329151 SPDYE16A6NNV3 312 aaPredicted RBP28.09■■■□□ 2.09
TMEM54-201ENST00000329151 CNMDO75829 334 aa28.09■■■□□ 2.09
TMEM54-201ENST00000329151 ATP5JP18859 108 aa28.09■■■□□ 2.09
TMEM54-201ENST00000329151 PTPREP23469 700 aa28.09■■■□□ 2.09
TMEM54-201ENST00000329151 CNGA1P29973 690 aa28.09■■■□□ 2.09
TMEM54-201ENST00000329151 CCND3P30281 292 aaPredicted RBP28.09■■■□□ 2.09
TMEM54-201ENST00000329151 GUCY1A2P33402 732 aa28.08■■■□□ 2.09
TMEM54-201ENST00000329151 ADD2P35612 726 aa28.08■■■□□ 2.09
TMEM54-201ENST00000329151 DPP9Q86TI2 863 aa28.08■■■□□ 2.09
TMEM54-201ENST00000329151 SIRT2Q8IXJ6 389 aa28.08■■■□□ 2.09
TMEM54-201ENST00000329151 LRRCC1Q9C099 1032 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms