RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 SEPT14Q6ZU15 432 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 TEKT1Q969V4 418 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 MCUR1Q96AQ8 359 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 XAGE2Q96GT9 111 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 TTC36A6NLP5 189 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 GCNT3O95395 438 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 CCDC89Q8N998 374 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 NUCKS1Q9H1E3 243 aaKnown RBP17.1■□□□□ 0.33
PTPN21-201ENST00000328736 BTG4Q9NY30 223 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 LMTK3Q96Q04 1460 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 NR1I2O75469 434 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 CASC4Q6P4E1 433 aa17.1■□□□□ 0.33
PTPN21-201ENST00000328736 MRPL44Q9H9J2 332 aaKnown RBP17.1■□□□□ 0.33
PTPN21-201ENST00000328736 TAF5LO75529 589 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 CD19P15391 556 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 MTMR3Q13615 1198 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 MAEAQ7L5Y9 396 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.09■□□□□ 0.33
PTPN21-201ENST00000328736 MIPOL1Q8TD10 442 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 IBTKQ9P2D0 1353 aaPredicted RBP17.09■□□□□ 0.33
PTPN21-201ENST00000328736 FAM170AA1A519 330 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 ZNF131P52739 623 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 NIM1KQ8IY84 436 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 ATP2A3Q93084 1043 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 PIK3C2GO75747 1445 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 USP19O94966 1318 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 HERC4Q5GLZ8 1057 aaPredicted RBP17.09■□□□□ 0.33
PTPN21-201ENST00000328736 RSPH3Q86UC2 560 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.09■□□□□ 0.33
PTPN21-201ENST00000328736 GNA14O95837 355 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 DBNDD2Q9BQY9 259 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 MYL10Q9BUA6 226 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 PARP2Q9UGN5 583 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 BCAP29Q9UHQ4 241 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 FEZ2Q9UHY8 353 aaPredicted RBP17.09■□□□□ 0.33
PTPN21-201ENST00000328736 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 AOX1Q06278 1338 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 WDR62O43379 1518 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 CTDSPL2Q05D32 466 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 IWS1Q96ST2 819 aa17.09■□□□□ 0.33
PTPN21-201ENST00000328736 PNMA6EA0A0J9YXQ4 647 aa17.08■□□□□ 0.33
PTPN21-201ENST00000328736 IL13P35225 146 aa17.08■□□□□ 0.33
PTPN21-201ENST00000328736 ERO1AQ96HE7 468 aa17.08■□□□□ 0.33
PTPN21-201ENST00000328736 AATFQ9NY61 560 aaKnown RBP eCLIP17.08■□□□□ 0.33
PTPN21-201ENST00000328736 SNX14Q9Y5W7 946 aa17.08■□□□□ 0.33
PTPN21-201ENST00000328736 USH1CQ9Y6N9 552 aa17.08■□□□□ 0.33
PTPN21-201ENST00000328736 MROH5Q6ZUA9 1318 aa17.08■□□□□ 0.33
PTPN21-201ENST00000328736 KDM3AQ9Y4C1 1321 aa17.08■□□□□ 0.33
PTPN21-201ENST00000328736 PPP2R5CQ13362 524 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 USH1GQ495M9 461 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 SH2D4BQ5SQS7 431 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 POLR2DO15514 142 aaKnown RBP17.08■□□□□ 0.32
PTPN21-201ENST00000328736 C10orf67Q8IYJ2 551 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 TBC1D22AQ8WUA7 517 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 LPIN2Q92539 896 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 TRPC6Q9Y210 931 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 MUM1L1Q5H9M0 696 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 MCTP2Q6DN12 878 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 CABP7Q86V35 215 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 TMTC1Q8IUR5 882 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 RBSNQ9H1K0 784 aa17.08■□□□□ 0.32
PTPN21-201ENST00000328736 TCOF1Q13428 1488 aaKnown RBP17.08■□□□□ 0.32
PTPN21-201ENST00000328736 ALDH1B1P30837 517 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 SFMBT2Q5VUG0 894 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 NSMFQ6X4W1 530 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 NT5C3AQ9H0P0 336 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 OGFRQ9NZT2 677 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 MAPK8IP1Q9UQF2 711 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 GBP6Q6ZN66 633 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 P3H4Q92791 437 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 SUCLG2Q96I99 432 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 GPAA1O43292 621 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 OATP04181 439 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 NLRP12P59046 1061 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 GNPTABQ3T906 1256 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 UHRF1BP1Q6BDS2 1440 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 PER1O15534 1290 aaPredicted RBP17.07■□□□□ 0.32
PTPN21-201ENST00000328736 CEP104O60308 925 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 KIF22Q14807 665 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 DIS3L2Q8IYB7 885 aaKnown RBP17.07■□□□□ 0.32
PTPN21-201ENST00000328736 C17orf53Q8N3J3 647 aaPredicted RBP17.07■□□□□ 0.32
PTPN21-201ENST00000328736 MED10Q9BTT4 135 aa17.07■□□□□ 0.32
PTPN21-201ENST00000328736 ATF7P17544 494 aaPredicted RBP17.06■□□□□ 0.32
PTPN21-201ENST00000328736 KLHL30Q0D2K2 578 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 ARHGEF2Q92974 986 aaKnown RBP17.06■□□□□ 0.32
PTPN21-201ENST00000328736 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
PTPN21-201ENST00000328736 PRDM1O75626 825 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 PCK1P35558 622 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 PAK2Q13177 524 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 CCDC105Q8IYK2 499 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 IMPACTQ9P2X3 320 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 IGSF3O75054 1194 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 PSMD6Q15008 389 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 PHLDB2Q86SQ0 1253 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 DEPTORQ8TB45 409 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 A1BGP04217 495 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 FANCCQ00597 558 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 PLCB4Q15147 1175 aa17.06■□□□□ 0.32
PTPN21-201ENST00000328736 TSNAXIP1Q2TAA8 658 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms