RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ENOX1Q8TC92 643 aaKnown RBP16■□□□□ 0.15
ATP2C1-201ENST00000328560 MED15Q96RN5 788 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 NLRP5P59047 1200 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 CELF1Q92879 486 aaKnown RBP16■□□□□ 0.15
ATP2C1-201ENST00000328560 NGLY1Q96IV0 654 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 SLIT2O94813 1529 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 LRP6O75581 1613 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 MTF1Q14872 753 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
ATP2C1-201ENST00000328560 TRIM65Q6PJ69 517 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 KRT222Q8N1A0 295 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 CTCFLQ8NI51 663 aaPredicted RBP16■□□□□ 0.15
ATP2C1-201ENST00000328560 RIOK1Q9BRS2 568 aaKnown RBP16■□□□□ 0.15
ATP2C1-201ENST00000328560 ST7Q9NRC1 585 aa16■□□□□ 0.15
ATP2C1-201ENST00000328560 CYP2D6P10635 497 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 MCM7P33993 719 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 PIK3AP1Q6ZUJ8 805 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 CASQ1P31415 396 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 KCNJ6P48051 423 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 PLCD1P51178 756 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 PTGDRQ13258 359 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 TC2NQ8N9U0 490 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 WDR24Q96S15 920 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 GTPBP4Q9BZE4 634 aaKnown RBP15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 ZSWIM4Q9H7M6 989 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 NUP98P52948 1817 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 FANCGO15287 622 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 CDC25AP30304 524 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 SARSP49591 514 aaKnown RBP15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 TTC38Q5R3I4 469 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 PPFIBP1Q86W92 1011 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 ZNF579Q8NAF0 562 aaKnown RBP15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 FAM84BQ96KN1 310 aaPredicted RBP15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 LZTFL1Q9NQ48 299 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 MINPP1Q9UNW1 487 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 MAPK8IP1Q9UQF2 711 aa15.99■□□□□ 0.15
ATP2C1-201ENST00000328560 VEGFAP15692 232 aaPredicted RBP15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 CD44P16070 742 aaKnown RBP15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 CTR9Q6PD62 1173 aa15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 PAGE5Q96GU1 130 aa15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 ZPR1O75312 459 aa15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 ZNF18P17022 549 aa15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 CCT6AP40227 531 aaKnown RBP15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 IRX2Q9BZI1 471 aaPredicted RBP15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 MORC2Q9Y6X9 1032 aaPredicted RBP15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 TSPY2A6NKD2 308 aa15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 CCDC93Q567U6 631 aa15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 TEX35Q5T0J7 233 aa15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 TMEM139Q8IV31 216 aa15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 RASSF8Q8NHQ8 419 aa15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 PHF20Q9BVI0 1012 aa15.98■□□□□ 0.15
ATP2C1-201ENST00000328560 ITGB4P16144 1822 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 XIRP1Q702N8 1843 aaKnown RBP15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 SOWAHDA6NJG2 315 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 PRPF3O43395 683 aaKnown RBP15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 CLCN6P51797 869 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 IGSF22Q8N9C0 903 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 ZBTB9Q96C00 473 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 NLRP3Q96P20 1036 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 ZNF446Q9NWS9 450 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 MYH3P11055 1940 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 SYNRGQ9UMZ2 1314 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 DISP2A7MBM2 1401 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 SLFN14P0C7P3 912 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 PRDX5P30044 214 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 TROAPQ12815 778 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 SRBD1Q8N5C6 995 aaKnown RBP15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 ZNF384Q8TF68 577 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 C8orf37Q96NL8 207 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 SETDB2Q96T68 719 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 CTNND2Q9UQB3 1225 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 PHLPP2Q6ZVD8 1323 aa15.97■□□□□ 0.15
ATP2C1-201ENST00000328560 MECOMQ03112 1051 aa15.96■□□□□ 0.15
ATP2C1-201ENST00000328560 UBE4AQ14139 1066 aa15.96■□□□□ 0.15
ATP2C1-201ENST00000328560 NBPF5PQ86XG9 351 aaPredicted RBP15.96■□□□□ 0.15
ATP2C1-201ENST00000328560 TRIML1Q8N9V2 468 aa15.96■□□□□ 0.15
ATP2C1-201ENST00000328560 AKR1B15C9JRZ8 316 aaPredicted RBP15.96■□□□□ 0.15
ATP2C1-201ENST00000328560 PES1O00541 588 aaKnown RBP15.96■□□□□ 0.15
ATP2C1-201ENST00000328560 MYO1BO43795 1136 aa15.96■□□□□ 0.15
ATP2C1-201ENST00000328560 NT5DC1Q5TFE4 455 aa15.96■□□□□ 0.15
ATP2C1-201ENST00000328560 RRAGBQ5VZM2 374 aa15.96■□□□□ 0.15
ATP2C1-201ENST00000328560 STX10O60499 249 aa15.96■□□□□ 0.14
ATP2C1-201ENST00000328560 UTP14CQ5TAP6 766 aaKnown RBP15.96■□□□□ 0.14
ATP2C1-201ENST00000328560 CLEC4GQ6UXB4 293 aa15.96■□□□□ 0.14
ATP2C1-201ENST00000328560 CCDC12Q8WUD4 166 aaPredicted RBP15.96■□□□□ 0.14
ATP2C1-201ENST00000328560 RBL2Q08999 1139 aa15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 FUT2Q10981 343 aa15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 TBX2Q13207 712 aaPredicted RBP15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 TMTC3Q6ZXV5 915 aa15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 RASGRP4Q8TDF6 673 aa15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 RBM28Q9NW13 759 aaKnown RBP15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 MCM9Q9NXL9 1143 aa15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 ANAPC4Q9UJX5 808 aa15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 PARP3Q9Y6F1 533 aa15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 TUBB4AP04350 444 aa15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 SPATA1Q5VX52 437 aa15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 GPKOWQ92917 476 aaPredicted RBP eCLIP15.95■□□□□ 0.145e-6■■□□□ 13.8
ATP2C1-201ENST00000328560 PLIN2Q99541 437 aa15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 CRNKL1Q9BZJ0 848 aaKnown RBP15.95■□□□□ 0.14
ATP2C1-201ENST00000328560 BSDC1Q9NW68 430 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms