RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 KIFC2Q96AC6 838 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 SUGCTQ9HAC7 445 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 DACH1Q9UI36 760 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 A0A087X0B3 334 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 PDE8AO60658 829 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 SLC5A1P13866 664 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 ZNF18P17022 549 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 CRKLP46109 303 aaKnown RBP13.69□□□□□ -0.22
NLRC3-201ENST00000324659 RASGRF1Q13972 1273 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 MORC3Q14149 939 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 KIF4BQ2VIQ3 1234 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 SUSD4Q5VX71 490 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 GPR161Q8N6U8 529 aaKnown RBP13.69□□□□□ -0.22
NLRC3-201ENST00000324659 SPATA5Q8NB90 893 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 SDR42E1Q8WUS8 393 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 MAPK8IP1Q9UQF2 711 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 JRKLQ9Y4A0 524 aa13.69□□□□□ -0.22
NLRC3-201ENST00000324659 PATL2C9JE40 543 aaKnown RBP13.68□□□□□ -0.22
NLRC3-201ENST00000324659 CD44P16070 742 aaKnown RBP13.68□□□□□ -0.22
NLRC3-201ENST00000324659 CDC25AP30304 524 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 AKAP17AQ02040 695 aaKnown RBP13.68□□□□□ -0.22
NLRC3-201ENST00000324659 SGMS1Q86VZ5 419 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 FCHSD1Q86WN1 690 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 ACRBPQ8NEB7 543 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 ENOX1Q8TC92 643 aaKnown RBP13.68□□□□□ -0.22
NLRC3-201ENST00000324659 DEF6Q9H4E7 631 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 PES1O00541 588 aaKnown RBP13.68□□□□□ -0.22
NLRC3-201ENST00000324659 ABL1P00519 1130 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 TPM1P09493 284 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 IFNAR1P17181 557 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 CASP14P31944 242 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 CHMP4BP1P59074 171 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 MAP3K12Q12852 859 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 RILPL1Q5EBL4 403 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 EARS2Q5JPH6 523 aaKnown RBP13.68□□□□□ -0.22
NLRC3-201ENST00000324659 SRLQ86TD4 932 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 WASF1Q92558 559 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
NLRC3-201ENST00000324659 UBAC1Q9BSL1 405 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 LOC102724428A0A0B4J2F2 783 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 ACTN4O43707 911 aaKnown RBP13.68□□□□□ -0.22
NLRC3-201ENST00000324659 SIK1P57059 783 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 ZNF174Q15697 407 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 TICAM2Q86XR7 235 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 SYNRGQ9UMZ2 1314 aa13.68□□□□□ -0.22
NLRC3-201ENST00000324659 FAM237AA0A1B0GTK4 181 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 TCRBV5S4A2TA0A5A2 114 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 GOLGA6L9A6NEM1 432 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 PLCD1P51178 756 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 LONRF2Q1L5Z9 754 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 EP400NLQ6ZTU2 488 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 CCDC87Q9NVE4 849 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 GSG1L2A8MUP6 293 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 WNT7AO00755 349 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 KIF5CO60282 957 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 GLI3P10071 1580 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 ZNF654Q8IZM8 581 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 VPS16Q9H269 839 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 CTNND2Q9UQB3 1225 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 NR1I3Q14994 352 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 FOXR1Q6PIV2 292 aa13.67□□□□□ -0.22
NLRC3-201ENST00000324659 CRACR2BQ8N4Y2 399 aaPredicted RBP13.67□□□□□ -0.22
NLRC3-201ENST00000324659 SYMPKQ92797 1274 aaKnown RBP13.67□□□□□ -0.22
NLRC3-201ENST00000324659 CYP2D7A0A087X1C5 515 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 H3BQF6 201 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 DEXIO95424 95 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 LIFRP42702 1097 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 GYG1P46976 350 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 MUM1L1Q5H9M0 696 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 SPEF2Q9C093 1822 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 WTIPA6NIX2 430 aaPredicted RBP13.66□□□□□ -0.22
NLRC3-201ENST00000324659 RSRC2Q7L4I2 434 aaKnown RBP13.66□□□□□ -0.22
NLRC3-201ENST00000324659 VGLL2Q8N8G2 317 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 FANCBQ8NB91 859 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 GOLGA5Q8TBA6 731 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 FUT8Q9BYC5 575 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 KRT23Q9C075 422 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 ADGRG1Q9Y653 693 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
NLRC3-201ENST00000324659 TRIM75PA6NK02 468 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
NLRC3-201ENST00000324659 CYP7A1P22680 504 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 TXLNAP40222 546 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 PUM3Q15397 648 aaKnown RBP13.65□□□□□ -0.22
NLRC3-201ENST00000324659 SLC35F6Q8N357 371 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 RABGGTAQ92696 567 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 PDE11AQ9HCR9 933 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 SRPRBQ9Y5M8 271 aaKnown RBP13.65□□□□□ -0.22
NLRC3-201ENST00000324659 LAMB4A4D0S4 1761 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 COL5A2P05997 1499 aaPredicted RBP13.65□□□□□ -0.22
NLRC3-201ENST00000324659 MYH7P12883 1935 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 SARSP49591 514 aaKnown RBP13.65□□□□□ -0.22
NLRC3-201ENST00000324659 FXR1P51114 621 aaKnown RBP eCLIP13.65□□□□□ -0.22
NLRC3-201ENST00000324659 NACAP1Q9BZK3 213 aa13.65□□□□□ -0.22
NLRC3-201ENST00000324659 FOXP1Q9H334 677 aaPredicted RBP13.65□□□□□ -0.22
NLRC3-201ENST00000324659 V9GY48 417 aaPredicted RBP13.65□□□□□ -0.22
NLRC3-201ENST00000324659 A0A1B0GTH6 734 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms