RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 A0A1W2PP64 1363 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 GUCY2FP51841 1108 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 WDR7Q9Y4E6 1490 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 MYO3AQ8NEV4 1616 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 FANCAO15360 1455 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 ADCY9O60503 1353 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 USP19O94966 1318 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 TTC19Q6DKK2 380 aaPredicted RBP7.82□□□□□ -1.16
SMC1A-201ENST00000322213 MMRN2Q9H8L6 949 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 KLC4Q9NSK0 619 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 SERPINA10Q9UK55 444 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 TNNQ9UQP3 1299 aa7.82□□□□□ -1.16
SMC1A-201ENST00000322213 MAP7D1Q3KQU3 841 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 CCDC84Q86UT8 332 aaPredicted RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 MYO7AQ13402 2215 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 ARID1BQ8NFD5 2236 aaPredicted RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 YEATS2Q9ULM3 1422 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 TLDC2A0PJX2 215 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 TULP2O00295 520 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 HAND2P61296 217 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 MIER3Q7Z3K6 550 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 CSRNP2Q9H175 543 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 SAMM50Q9Y512 469 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 LMNAP02545 664 aaKnown RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 ELF1P32519 619 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 PDE1CQ14123 709 aaPredicted RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 SLC9C1Q4G0N8 1177 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 EMBQ6PCB8 327 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 CARMIL3Q8ND23 1372 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 SKIP12755 728 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 CCDC92Q53HC0 331 aaPredicted RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 PARP9Q8IXQ6 854 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 LRRC7Q96NW7 1537 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 GRM8O00222 908 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 STX17P56962 302 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 IFIT5Q13325 482 aaKnown RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 CFAP157Q5JU67 520 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 TCP11Q8WWU5 503 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 NOC4LQ9BVI4 516 aaKnown RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 NUF2Q9BZD4 464 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 BCAP29Q9UHQ4 241 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 FAM83GA6ND36 823 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 KRT9P35527 623 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 IFIT1BQ5T764 474 aaKnown RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 RBM26Q5T8P6 1007 aaKnown RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 CCDC82Q8N4S0 544 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 MTMR6Q9Y217 621 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 KCNJ6P48051 423 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 PLCB4Q15147 1175 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 SLF1Q9BQI6 1058 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 BATF3Q9NR55 127 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 TARSL2A2RTX5 802 aaKnown RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 PLCD1P51178 756 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 OTUD7AQ8TE49 926 aaPredicted RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 RRP36Q96EU6 259 aaKnown RBP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 CARD10Q9BWT7 1032 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 DDX21Q9NR30 783 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMC1A-201ENST00000322213 PPP1R9AQ9ULJ8 1098 aa7.81□□□□□ -1.16
SMC1A-201ENST00000322213 MYO5AQ9Y4I1 1855 aaKnown RBP7.8□□□□□ -1.16
SMC1A-201ENST00000322213 MINDY4BA8MYZ0 360 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 KCNJ18B7U540 433 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 KCNJ12Q14500 433 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 CCDC61Q9Y6R9 512 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 IFT172Q9UG01 1749 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 MMP14P50281 582 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 RASIP1Q5U651 963 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 KCTD16Q68DU8 428 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 C8orf58Q8NAV2 365 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 ERMNQ8TAM6 284 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 RMDN2Q96LZ7 410 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 DNAI2Q9GZS0 605 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 HAUS4Q9H6D7 363 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 HYOU1Q9Y4L1 999 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 FER1L6Q2WGJ9 1857 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 CORO7P57737 925 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 PDE4BQ07343 736 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 CUL1Q13616 776 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 E2F5Q15329 346 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 NELFBQ8WX92 580 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 ANKRD36CQ5JPF3 1778 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 CCDC169A6NNP5 214 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 RANBP6O60518 1105 aaKnown RBP7.8□□□□□ -1.16
SMC1A-201ENST00000322213 TCP1P17987 556 aaKnown RBP7.8□□□□□ -1.16
SMC1A-201ENST00000322213 ZNF76P36508 570 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 CUL4AQ13619 759 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 TNIP1Q15025 636 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 TMEM132AQ24JP5 1023 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 HELLSQ9NRZ9 838 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 A0A1W2PQ27 194 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 A0A1W2PQ64 194 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 A0A1W2PQD8 194 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 FERMT2Q96AC1 680 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 ATP6V0A2Q9Y487 856 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 PTPRTO14522 1441 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 EVA1CP58658 441 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 ATP2B2Q01814 1243 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 PSMD2Q13200 908 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 SMC1BQ8NDV3 1235 aa7.8□□□□□ -1.16
SMC1A-201ENST00000322213 ZCCHC11Q5TAX3 1644 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms