RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 CUL4BQ13620 913 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 WDR93Q6P2C0 686 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 CMTR1Q8N1G2 835 aaKnown RBP20.24■□□□□ 0.83
PRKCB-202ENST00000321728 FOXP1Q9H334 677 aaPredicted RBP20.24■□□□□ 0.83
PRKCB-202ENST00000321728 CABP5Q9NP86 173 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 MYO1AQ9UBC5 1043 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 MYH8P13535 1937 aa20.24■□□□□ 0.83
PRKCB-202ENST00000321728 MCAMP43121 646 aa20.23■□□□□ 0.83
PRKCB-202ENST00000321728 CYP26C1Q6V0L0 522 aa20.23■□□□□ 0.83
PRKCB-202ENST00000321728 ABHD10Q9NUJ1 306 aa20.23■□□□□ 0.83
PRKCB-202ENST00000321728 GUCA1BQ9UMX6 200 aa20.23■□□□□ 0.83
PRKCB-202ENST00000321728 PPFIA4O75335 1185 aa20.23■□□□□ 0.83
PRKCB-202ENST00000321728 IFNAR1P17181 557 aa20.23■□□□□ 0.83
PRKCB-202ENST00000321728 EPSTI1Q96J88 318 aa20.23■□□□□ 0.83
PRKCB-202ENST00000321728 CTCFLQ8NI51 663 aaPredicted RBP20.22■□□□□ 0.83
PRKCB-202ENST00000321728 VPS16Q9H269 839 aa20.22■□□□□ 0.83
PRKCB-202ENST00000321728 ZSWIM5Q9P217 1185 aa20.22■□□□□ 0.83
PRKCB-202ENST00000321728 CT47A1Q5JQC4 288 aaPredicted RBP20.22■□□□□ 0.83
PRKCB-202ENST00000321728 OXER1Q8TDS5 423 aa20.22■□□□□ 0.83
PRKCB-202ENST00000321728 FAM89AQ96GI7 184 aa20.22■□□□□ 0.83
PRKCB-202ENST00000321728 GDAP1L1Q96MZ0 367 aa20.22■□□□□ 0.83
PRKCB-202ENST00000321728 CTNND2Q9UQB3 1225 aa20.22■□□□□ 0.83
PRKCB-202ENST00000321728 A0A087X0B3 334 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 ENC1O14682 589 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 SYF2O95926 243 aaKnown RBP20.21■□□□□ 0.83
PRKCB-202ENST00000321728 AMPD2Q01433 879 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 PAGE5Q96GU1 130 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 STRN4Q9NRL3 753 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 RNF225M0QZC1 329 aaPredicted RBP20.21■□□□□ 0.83
PRKCB-202ENST00000321728 LIFRP42702 1097 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 CTDSPL2Q05D32 466 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 VIPAS39Q9H9C1 493 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 TOMM22Q9NS69 142 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 TRIM10Q9UDY6 481 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 CAMTA1Q9Y6Y1 1673 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 ZNF532Q9HCE3 1301 aa20.21■□□□□ 0.83
PRKCB-202ENST00000321728 KRT31Q15323 416 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 RTN1Q16799 776 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 MAP9Q49MG5 647 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 DNAJC21Q5F1R6 531 aaKnown RBP20.2■□□□□ 0.82
PRKCB-202ENST00000321728 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
PRKCB-202ENST00000321728 SMARCC1Q92922 1105 aaPredicted RBP20.2■□□□□ 0.82
PRKCB-202ENST00000321728 HDAC6Q9UBN7 1215 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 ITIH6Q6UXX5 1313 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 PPP1R3GB7ZBB8 358 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 SEMA3EO15041 775 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 KRT9P35527 623 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 RIN2Q8WYP3 895 aaPredicted RBP20.2■□□□□ 0.82
PRKCB-202ENST00000321728 AIDAQ96BJ3 306 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 ZKSCAN3Q9BRR0 538 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 FECHP22830 423 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 AARSP49588 968 aaKnown RBP eCLIP20.2■□□□□ 0.825e-7■■■■□ 20
PRKCB-202ENST00000321728 USP14P54578 494 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 METTL24Q5JXM2 366 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 STAMQ92783 540 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 DRC1Q96MC2 740 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 TBC1D2BQ9UPU7 963 aa20.2■□□□□ 0.82
PRKCB-202ENST00000321728 PIH1D3Q9NQM4 214 aaKnown RBP20.19■□□□□ 0.82
PRKCB-202ENST00000321728 HPCAL4Q9UM19 191 aa20.19■□□□□ 0.82
PRKCB-202ENST00000321728 MYH7P12883 1935 aa20.19■□□□□ 0.82
PRKCB-202ENST00000321728 EFCAB13Q8IY85 973 aa20.19■□□□□ 0.82
PRKCB-202ENST00000321728 GSDMAQ96QA5 445 aa20.19■□□□□ 0.82
PRKCB-202ENST00000321728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.19■□□□□ 0.82
PRKCB-202ENST00000321728 TAB2Q9NYJ8 693 aa20.19■□□□□ 0.82
PRKCB-202ENST00000321728 ABCC12Q96J65 1359 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 ZMYND10O75800 440 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 PRPF6O94906 941 aaKnown RBP20.18■□□□□ 0.82
PRKCB-202ENST00000321728 DEXIO95424 95 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 MCM3P25205 808 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 IFIT5Q13325 482 aaKnown RBP20.18■□□□□ 0.82
PRKCB-202ENST00000321728 STIM1Q13586 685 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 NUP133Q8WUM0 1156 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 SYMPKQ92797 1274 aaKnown RBP20.18■□□□□ 0.82
PRKCB-202ENST00000321728 CAPZA3Q96KX2 299 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 CHP1Q99653 195 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 CRACR2AQ9BSW2 395 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 AATFQ9NY61 560 aaKnown RBP eCLIP20.18■□□□□ 0.82
PRKCB-202ENST00000321728 WDR17Q8IZU2 1322 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 KIF1AQ12756 1690 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 TRIM75PA6NK02 468 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 TRAPPC11Q7Z392 1133 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 MMS19Q96T76 1030 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 NAPBQ9H115 298 aa20.18■□□□□ 0.82
PRKCB-202ENST00000321728 EPN1Q9Y6I3 576 aaPredicted RBP20.18■□□□□ 0.82
PRKCB-202ENST00000321728 FAM205CA6NFA0 338 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 SRGAP2O75044 1071 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 GPTP24298 496 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 DPYDQ12882 1025 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 TTF1Q15361 905 aaPredicted RBP20.17■□□□□ 0.82
PRKCB-202ENST00000321728 UBE3CQ15386 1083 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 ANKRD20A12PQ8NF67 263 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 PDE6AP16499 860 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 RRAGBQ5VZM2 374 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 MICALL1Q8N3F8 863 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 COG1Q8WTW3 980 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 DEF6Q9H4E7 631 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 YY1AP1Q9H869 796 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 BRMS1Q9HCU9 246 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 FBXO3Q9UK99 471 aa20.17■□□□□ 0.82
PRKCB-202ENST00000321728 TJP1Q07157 1748 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms