RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 AIFM3Q96NN9 605 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 NYXQ9GZU5 481 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 TTC36A6NLP5 189 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 POTEB2H3BUK9 544 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 USPL1Q5W0Q7 1092 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 C8orf74Q6P047 294 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 NBPF11Q86T75 865 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 LRRC27Q9C0I9 530 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 EIF4E1BA6NMX2 242 aaKnown RBP9.83□□□□□ -0.84
SSBP2-201ENST00000320672 ZNF75DP51815 510 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 PAK1Q13153 545 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 DCAF5Q96JK2 942 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 DNAI2Q9GZS0 605 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.83□□□□□ -0.84
SSBP2-201ENST00000320672 ASAP1Q9ULH1 1129 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 PTPN22Q9Y2R2 807 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 PDE8AO60658 829 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 SSTR3P32745 418 aaPredicted RBP9.83□□□□□ -0.84
SSBP2-201ENST00000320672 C2CD5Q86YS7 1000 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 GLG1Q92896 1179 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 SMC6Q96SB8 1091 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 DENND2AQ9ULE3 1009 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 ODF2LQ9ULJ1 636 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 PLBD2Q8NHP8 589 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 ANKRD36BQ8N2N9 1353 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 BTBD18B2RXH4 712 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 CLIC2O15247 247 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 CXCR5P32302 372 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 CACNB3P54284 484 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 CALCOCO2Q13137 446 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 PUM3Q15397 648 aaKnown RBP9.83□□□□□ -0.84
SSBP2-201ENST00000320672 NCAPG2Q86XI2 1143 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 CTAGE3PQ8IX95 158 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 MED10Q9BTT4 135 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 TBC1D8O95759 1140 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 CCDC110Q8TBZ0 833 aa9.83□□□□□ -0.84
SSBP2-201ENST00000320672 EAF2Q96CJ1 260 aaPredicted RBP9.83□□□□□ -0.84
SSBP2-201ENST00000320672 ELP1O95163 1332 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 OPA1O60313 960 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 STRN3Q13033 797 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 PDE1CQ14123 709 aaPredicted RBP9.82□□□□□ -0.84
SSBP2-201ENST00000320672 PRIMPOLQ96LW4 560 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 GOLGA6L9A6NEM1 432 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 CASP1P29466 404 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 GNA11P29992 359 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 NCBP1Q09161 790 aaKnown RBP9.82□□□□□ -0.84
SSBP2-201ENST00000320672 POLA2Q14181 598 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 CALCRLQ16602 461 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 TTC6Q86TZ1 520 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 GAS2L3Q86XJ1 694 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 SMC5Q8IY18 1101 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 CCDC105Q8IYK2 499 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 FERMT1Q9BQL6 677 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 GREM2Q9H772 168 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 FAM196BA6NMK8 535 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 GKAP1Q5VSY0 366 aaPredicted RBP9.82□□□□□ -0.84
SSBP2-201ENST00000320672 KCTD16Q68DU8 428 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 FAM76AQ8TAV0 307 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 IP6K1Q92551 441 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 ANKFY1Q9P2R3 1169 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 DCUN1D2Q6PH85 259 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 NAPGQ99747 312 aaPredicted RBP9.82□□□□□ -0.84
SSBP2-201ENST00000320672 CCDC77Q9BR77 488 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 TRIM7Q9C029 511 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 PYCARDQ9ULZ3 195 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 FAM135AQ9P2D6 1515 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 STX10O60499 249 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 KLHL30Q0D2K2 578 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 GCKRQ14397 625 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 DYNLL2Q96FJ2 89 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 LMBRD1Q9NUN5 540 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 SH3TC1Q8TE82 1336 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 SFI1A8K8P3 1242 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 PHKA1P46020 1223 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 SESN3P58005 492 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 IL1RL1Q01638 556 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 TRIP13Q15645 432 aaPredicted RBP9.82□□□□□ -0.84
SSBP2-201ENST00000320672 PPM1EQ8WY54 764 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 EPSTI1Q96J88 318 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 RIMS2Q9UQ26 1411 aa9.82□□□□□ -0.84
SSBP2-201ENST00000320672 ADCY7P51828 1080 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 ERCC6LQ2NKX8 1250 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 ARHGAP45Q92619 1136 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 FANCAO15360 1455 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 BICDL2A1A5D9 508 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 PPARAQ07869 468 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 LONRF2Q1L5Z9 754 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 TSR3Q9UJK0 312 aaKnown RBP9.81□□□□□ -0.84
SSBP2-201ENST00000320672 USP21Q9UK80 565 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 TRIM37O94972 964 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 PFKFB1P16118 471 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 OAS2P29728 719 aaKnown RBP9.81□□□□□ -0.84
SSBP2-201ENST00000320672 GPR162Q16538 588 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 ZNF365Q70YC5 407 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 PER1O15534 1290 aaPredicted RBP9.81□□□□□ -0.84
SSBP2-201ENST00000320672 BNIP3LO60238 219 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 DEXIO95424 95 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 CCDC172P0C7W6 258 aa9.81□□□□□ -0.84
SSBP2-201ENST00000320672 POLR2FP61218 127 aaKnown RBP9.81□□□□□ -0.84
SSBP2-201ENST00000320672 POSTNQ15063 836 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms