RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 IMPACTQ9P2X3 320 aa17.76■□□□□ 0.43
SHROOM1-201ENST00000319854 URI1O94763 535 aaPredicted RBP17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 ATP1A3P13637 1013 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 PTPAQ15257 358 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 SF3B3Q15393 1217 aaKnown RBP17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 NOM1Q5C9Z4 860 aaKnown RBP17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 USP49Q70CQ1 688 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 CNNM3Q8NE01 707 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 USP21Q9UK80 565 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 PLCH1Q4KWH8 1693 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 TOB1P50616 345 aaPredicted RBP17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 TEX35Q5T0J7 233 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 TPTE2Q6XPS3 522 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 MAP3K14Q99558 947 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 MMP1P03956 469 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 RFC4P35249 363 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 JMYQ8N9B5 988 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 KCNH3Q9ULD8 1083 aa17.75■□□□□ 0.43
SHROOM1-201ENST00000319854 DIXDC1Q155Q3 683 aa17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 CTR9Q6PD62 1173 aa17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 REXO1L1PQ8IX06 675 aa17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 ZSCAN10Q96SZ4 725 aaPredicted RBP17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 RSPH14Q9UHP6 348 aa17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 TPM4P67936 248 aa17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 NFIXQ14938 502 aa17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 DZIP1Q86YF9 867 aaKnown RBP17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 C10orf67Q8IYJ2 551 aa17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 FAM177A1Q8N128 213 aaPredicted RBP17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 MCM9Q9NXL9 1143 aa17.74■□□□□ 0.43
SHROOM1-201ENST00000319854 POLR2DO15514 142 aaKnown RBP17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 IQCA1Q86XH1 822 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 NSUN4Q96CB9 384 aaKnown RBP17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 TMX1Q9H3N1 280 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 NARFQ9UHQ1 456 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 ZNF804BA4D1E1 1349 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 PHLPP1O60346 1717 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 USP17L8P0C7I0 530 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 MUM1L1Q5H9M0 696 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 EARS2Q5JPH6 523 aaKnown RBP17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 TXLNBQ8N3L3 684 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 MNS1Q8NEH6 495 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 TSPYL1Q9H0U9 437 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 ARGLU1Q9NWB6 273 aaPredicted RBP17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 VEGFAP15692 232 aaPredicted RBP17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 SMC1AQ14683 1233 aaKnown RBP17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 ZSCAN26Q16670 478 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 FAM196AQ6ZSG2 479 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 CATIPQ7Z7H3 387 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 CCDC150Q8NCX0 1101 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 PARP3Q9Y6F1 533 aa17.73■□□□□ 0.43
SHROOM1-201ENST00000319854 DEXIO95424 95 aa17.72■□□□□ 0.43
SHROOM1-201ENST00000319854 WASF1Q92558 559 aa17.72■□□□□ 0.43
SHROOM1-201ENST00000319854 BAZ2AQ9UIF9 1905 aaKnown RBP17.72■□□□□ 0.43
SHROOM1-201ENST00000319854 CCDC196A0A1B0GTZ2 297 aa17.72■□□□□ 0.43
SHROOM1-201ENST00000319854 CASP1P29466 404 aa17.72■□□□□ 0.43
SHROOM1-201ENST00000319854 CC2D1AQ6P1N0 951 aaPredicted RBP17.72■□□□□ 0.43
SHROOM1-201ENST00000319854 KRI1Q8N9T8 703 aaKnown RBP17.72■□□□□ 0.43
SHROOM1-201ENST00000319854 SHISA4Q96DD7 197 aa17.72■□□□□ 0.43
SHROOM1-201ENST00000319854 DYNLL2Q96FJ2 89 aa17.72■□□□□ 0.43
SHROOM1-201ENST00000319854 TSPY2A6NKD2 308 aa17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 MYO1CO00159 1063 aa17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 RPS6KA4O75676 772 aa17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 NCAPHQ15003 741 aa17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 GRIK5Q16478 980 aa17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 MEX3CQ5U5Q3 659 aaKnown RBP17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 FOXP4Q8IVH2 680 aaPredicted RBP17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 PCDHA5Q9Y5H7 936 aa17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 METTL16Q86W50 562 aaKnown RBP17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 STAMQ92783 540 aa17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 SAP30BPQ9UHR5 308 aaKnown RBP17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 AHDC1Q5TGY3 1603 aaPredicted RBP17.71■□□□□ 0.43
SHROOM1-201ENST00000319854 PHLPP2Q6ZVD8 1323 aa17.71■□□□□ 0.42
SHROOM1-201ENST00000319854 NLRP12P59046 1061 aa17.71■□□□□ 0.42
SHROOM1-201ENST00000319854 SEC23AQ15436 765 aa17.71■□□□□ 0.42
SHROOM1-201ENST00000319854 DPF2Q92785 391 aa17.71■□□□□ 0.42
SHROOM1-201ENST00000319854 DCP1AQ9NPI6 582 aaPredicted RBP17.71■□□□□ 0.42
SHROOM1-201ENST00000319854 DDX60Q8IY21 1712 aaKnown RBP17.71■□□□□ 0.42
SHROOM1-201ENST00000319854 WNT7AO00755 349 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 ZNF174Q15697 407 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 FBXO33Q7Z6M2 555 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 TMTC2Q8N394 836 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 NYXQ9GZU5 481 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 MYH2Q9UKX2 1941 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 MYH15Q9Y2K3 1946 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 AFMP43652 599 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 RASSF4Q9H2L5 321 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 SERTAD1Q9UHV2 236 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
SHROOM1-201ENST00000319854 EFCAB8A8MWE9 144 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 SERPINC1P01008 464 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 PRR29P0C7W0 189 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 USP5P45974 858 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 RESP18Q5W5W9 173 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 SLC44A5Q8NCS7 719 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 CRNKL1Q9BZJ0 848 aaKnown RBP17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 HSD3B7Q9H2F3 369 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 COBLO75128 1261 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 PPP6R2O75170 966 aa17.69■□□□□ 0.42
SHROOM1-201ENST00000319854 TNNT3P45378 269 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms