RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.2
SYCN-201ENST00000318438 USP17L10C9JJH3 530 aa16.33■□□□□ 0.2
SYCN-201ENST00000318438 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
SYCN-201ENST00000318438 CLTBP09497 229 aa16.33■□□□□ 0.2
SYCN-201ENST00000318438 HOXC6P09630 235 aa16.33■□□□□ 0.2
SYCN-201ENST00000318438 RAG1P15918 1043 aa16.33■□□□□ 0.2
SYCN-201ENST00000318438 IGFBP4P22692 258 aa16.33■□□□□ 0.2
SYCN-201ENST00000318438 RFX5P48382 616 aaPredicted RBP16.33■□□□□ 0.2
SYCN-201ENST00000318438 ZNF384Q8TF68 577 aa16.33■□□□□ 0.2
SYCN-201ENST00000318438 EMILIN3Q9NT22 766 aa16.33■□□□□ 0.2
SYCN-201ENST00000318438 GRXCR1A8MXD5 290 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 C19orf81C9J6K1 198 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 IGHA2P01877 340 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 ADORA1P30542 326 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 CCNA1P78396 465 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 MECOMQ03112 1051 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 RASGRF1Q13972 1273 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 GRB14Q14449 540 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 LRRC41Q15345 812 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 C1orf53Q5VUE5 145 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 PBX4Q9BYU1 374 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 EPHX3Q9H6B9 360 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 HERC5Q9UII4 1024 aaKnown RBP16.32■□□□□ 0.2
SYCN-201ENST00000318438 RABGAP1Q9Y3P9 1069 aa16.32■□□□□ 0.2
SYCN-201ENST00000318438 KIAA0355O15063 1070 aa16.31■□□□□ 0.2
SYCN-201ENST00000318438 PQBP1O60828 265 aaKnown RBP16.31■□□□□ 0.2
SYCN-201ENST00000318438 GDF11O95390 407 aa16.31■□□□□ 0.2
SYCN-201ENST00000318438 ASNSP08243 561 aa16.31■□□□□ 0.2
SYCN-201ENST00000318438 BMP1P13497 986 aa16.31■□□□□ 0.2
SYCN-201ENST00000318438 TFF2Q03403 129 aa16.31■□□□□ 0.2
SYCN-201ENST00000318438 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
SYCN-201ENST00000318438 ALYREFQ86V81 257 aaKnown RBP16.31■□□□□ 0.2
SYCN-201ENST00000318438 SIL1Q9H173 461 aa16.31■□□□□ 0.2
SYCN-201ENST00000318438 SMC4Q9NTJ3 1288 aa16.31■□□□□ 0.2
SYCN-201ENST00000318438 IVNS1ABPQ9Y6Y0 642 aa16.31■□□□□ 0.2
SYCN-201ENST00000318438 SEPT4O43236 478 aa16.3■□□□□ 0.2
SYCN-201ENST00000318438 FAM47AQ5JRC9 791 aa16.3■□□□□ 0.2
SYCN-201ENST00000318438 CCDC102BQ68D86 513 aa16.3■□□□□ 0.2
SYCN-201ENST00000318438 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.3■□□□□ 0.2
SYCN-201ENST00000318438 TMEM39AQ9NV64 488 aa16.3■□□□□ 0.2
SYCN-201ENST00000318438 CXXC1Q9P0U4 656 aaPredicted RBP16.3■□□□□ 0.2
SYCN-201ENST00000318438 KCNQ1P51787 676 aa16.29■□□□□ 0.2
SYCN-201ENST00000318438 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
SYCN-201ENST00000318438 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
SYCN-201ENST00000318438 PRAMEF19Q5SWL8 479 aa16.29■□□□□ 0.2
SYCN-201ENST00000318438 SPTY2D1Q68D10 685 aaPredicted RBP16.29■□□□□ 0.2
SYCN-201ENST00000318438 DNAJC18Q9H819 358 aa16.29■□□□□ 0.2
SYCN-201ENST00000318438 BTBD7Q9P203 1132 aa16.29■□□□□ 0.2
SYCN-201ENST00000318438 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
SYCN-201ENST00000318438 MUC6Q6W4X9 2439 aa16.29■□□□□ 0.2
SYCN-201ENST00000318438 TCF20Q9UGU0 1960 aaKnown RBP16.29■□□□□ 0.2
SYCN-201ENST00000318438 TMEM31Q5JXX7 168 aa16.28■□□□□ 0.2
SYCN-201ENST00000318438 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
SYCN-201ENST00000318438 DPP9Q86TI2 863 aa16.28■□□□□ 0.2
SYCN-201ENST00000318438 USP44Q9H0E7 712 aa16.28■□□□□ 0.2
SYCN-201ENST00000318438 PI4KBQ9UBF8 816 aa16.28■□□□□ 0.2
SYCN-201ENST00000318438 ZBTB21Q9ULJ3 1066 aa16.28■□□□□ 0.2
SYCN-201ENST00000318438 OLFML2BQ68BL8 750 aa16.27■□□□□ 0.2
SYCN-201ENST00000318438 ERICH6Q7L0X2 663 aa16.27■□□□□ 0.2
SYCN-201ENST00000318438 TEX11Q8IYF3 940 aa16.27■□□□□ 0.2
SYCN-201ENST00000318438 MICALL1Q8N3F8 863 aa16.27■□□□□ 0.2
SYCN-201ENST00000318438 PHF24Q9UPV7 400 aa16.27■□□□□ 0.2
SYCN-201ENST00000318438 SIPA1L1O43166 1804 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 USP17L15C9J2P7 530 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 USP17L13C9JLJ4 530 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 USP17L11C9JVI0 530 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 USP17L18D6R9N7 530 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 USP17L22D6RA61 530 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 USP17L17D6RBQ6 530 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 USP17L19D6RCP7 530 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 USP17L20D6RJB6 530 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 ADORA2AP29274 412 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 FAAP100Q0VG06 881 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 USP17L24Q0WX57 530 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 C16orf59Q7L2K0 433 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 SH3RF3Q8TEJ3 882 aaPredicted RBP16.26■□□□□ 0.19
SYCN-201ENST00000318438 SNX27Q96L92 541 aa16.26■□□□□ 0.19
SYCN-201ENST00000318438 TSPYL2Q9H2G4 693 aaPredicted RBP16.26■□□□□ 0.19
SYCN-201ENST00000318438 PDS5AQ29RF7 1337 aaKnown RBP16.25■□□□□ 0.19
SYCN-201ENST00000318438 FAM86C2PA6NEL3 165 aa16.25■□□□□ 0.19
SYCN-201ENST00000318438 MAP4K4O95819 1239 aaPredicted RBP16.25■□□□□ 0.19
SYCN-201ENST00000318438 RARSP54136 660 aaKnown RBP16.25■□□□□ 0.19
SYCN-201ENST00000318438 TMEM240Q5SV17 173 aa16.25■□□□□ 0.19
SYCN-201ENST00000318438 SLC44A5Q8NCS7 719 aa16.25■□□□□ 0.19
SYCN-201ENST00000318438 NSUN4Q96CB9 384 aaKnown RBP16.25■□□□□ 0.19
SYCN-201ENST00000318438 MYO9BQ13459 2157 aa16.25■□□□□ 0.19
SYCN-201ENST00000318438 PLXNA1Q9UIW2 1896 aa16.25■□□□□ 0.19
SYCN-201ENST00000318438 A0A1W2PQ45 241 aaPredicted RBP16.24■□□□□ 0.19
SYCN-201ENST00000318438 A0A1W2PQY0 241 aa16.24■□□□□ 0.19
SYCN-201ENST00000318438 ZBTB22O15209 634 aa16.24■□□□□ 0.19
SYCN-201ENST00000318438 COBLO75128 1261 aa16.24■□□□□ 0.19
SYCN-201ENST00000318438 CIAO1O76071 339 aa16.24■□□□□ 0.19
SYCN-201ENST00000318438 PGK1P00558 417 aa16.24■□□□□ 0.19
SYCN-201ENST00000318438 CATSPERGQ6ZRH7 1159 aa16.24■□□□□ 0.19
SYCN-201ENST00000318438 TBC1D9Q6ZT07 1266 aa16.24■□□□□ 0.19
SYCN-201ENST00000318438 CRACR2BQ8N4Y2 399 aaPredicted RBP16.24■□□□□ 0.19
SYCN-201ENST00000318438 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
SYCN-201ENST00000318438 FEZ1Q99689 392 aa16.24■□□□□ 0.19
SYCN-201ENST00000318438 TRIM34Q9BYJ4 488 aa16.24■□□□□ 0.19
SYCN-201ENST00000318438 NKX2-4Q9H2Z4 354 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms