RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 TTLL6Q8N841 843 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 LINC00301Q8NCQ3 95 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 TBC1D22AQ8WUA7 517 aa18.26■□□□□ 0.51
USH1C-202ENST00000318024 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 FAM205AQ6ZU69 1335 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.25■□□□□ 0.51
USH1C-202ENST00000318024 BTDP43251 543 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 NDUFA8P51970 172 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 FBXL16Q8N461 479 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 TGFBRAP1Q8WUH2 860 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 STAG1Q8WVM7 1258 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 ZNF274Q96GC6 653 aaPredicted RBP18.25■□□□□ 0.51
USH1C-202ENST00000318024 RTFDC1Q9BY42 306 aaPredicted RBP18.25■□□□□ 0.51
USH1C-202ENST00000318024 MROH7-TTC4A0A0A0MT08 1334 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 KLF18A0A0U1RQI7 1052 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 ZRANB2O95218 330 aaKnown RBP eCLIP18.25■□□□□ 0.51
USH1C-202ENST00000318024 BAG3O95817 575 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 USP17L8P0C7I0 530 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 USP5P45974 858 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 ME1P48163 572 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 CLCN6P51797 869 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 FOSBP53539 338 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 EVCP57679 992 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 TMEM51Q9NW97 253 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 MCM9Q9NXL9 1143 aa18.25■□□□□ 0.51
USH1C-202ENST00000318024 LDHCP07864 332 aa18.24■□□□□ 0.51
USH1C-202ENST00000318024 SCNN1DP51172 638 aa18.24■□□□□ 0.51
USH1C-202ENST00000318024 BMS1Q14692 1282 aaKnown RBP18.24■□□□□ 0.51
USH1C-202ENST00000318024 SYT10Q6XYQ8 523 aa18.24■□□□□ 0.51
USH1C-202ENST00000318024 UPF1Q92900 1129 aaKnown RBP eCLIP18.24■□□□□ 0.51
USH1C-202ENST00000318024 NOL10Q9BSC4 688 aaKnown RBP18.24■□□□□ 0.51
USH1C-202ENST00000318024 HSD3B7Q9H2F3 369 aa18.24■□□□□ 0.51
USH1C-202ENST00000318024 IFNKQ9P0W0 207 aa18.24■□□□□ 0.51
USH1C-202ENST00000318024 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.24■□□□□ 0.51
USH1C-202ENST00000318024 CHD4Q14839 1912 aa18.24■□□□□ 0.51
USH1C-202ENST00000318024 A0A1B0GVL5 298 aa18.23■□□□□ 0.51
USH1C-202ENST00000318024 RXRAP19793 462 aa18.23■□□□□ 0.51
USH1C-202ENST00000318024 ATP8A2Q9NTI2 1148 aa18.23■□□□□ 0.51
USH1C-202ENST00000318024 CCDC66A2RUB6 948 aa18.23■□□□□ 0.51
USH1C-202ENST00000318024 FANCGO15287 622 aa18.23■□□□□ 0.51
USH1C-202ENST00000318024 ECE2O60344 883 aa18.23■□□□□ 0.51
USH1C-202ENST00000318024 PLA2G4AP47712 749 aa18.23■□□□□ 0.51
USH1C-202ENST00000318024 MAPKAPK5Q8IW41 473 aa18.23■□□□□ 0.51
USH1C-202ENST00000318024 KRT23Q9C075 422 aa18.23■□□□□ 0.51
USH1C-202ENST00000318024 CNNM2Q9H8M5 875 aa18.23■□□□□ 0.51
USH1C-202ENST00000318024 ANGEL1Q9UNK9 670 aaKnown RBP18.23■□□□□ 0.51
USH1C-202ENST00000318024 TTF2Q9UNY4 1162 aaKnown RBP18.23■□□□□ 0.51
USH1C-202ENST00000318024 IFIT3O14879 490 aaKnown RBP18.22■□□□□ 0.51
USH1C-202ENST00000318024 GUCY1B3Q02153 619 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 TRIM65Q6PJ69 517 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 TMC6Q7Z403 805 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 IGDCC4Q8TDY8 1250 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 MTFR1LQ9H019 292 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 GOLGA8BA8MQT2 603 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 SH2B2O14492 632 aaPredicted RBP18.22■□□□□ 0.51
USH1C-202ENST00000318024 POLD1P28340 1107 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 CYP2C19P33261 490 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 DHX8Q14562 1220 aaKnown RBP18.22■□□□□ 0.51
USH1C-202ENST00000318024 TMEM67Q5HYA8 995 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 TMX1Q9H3N1 280 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 SAP30BPQ9UHR5 308 aaKnown RBP18.22■□□□□ 0.51
USH1C-202ENST00000318024 ANAPC4Q9UJX5 808 aa18.22■□□□□ 0.51
USH1C-202ENST00000318024 PHLPP2Q6ZVD8 1323 aa18.21■□□□□ 0.51
USH1C-202ENST00000318024 GPR75-ASB3A0A0A6YYF3 556 aa18.21■□□□□ 0.51
USH1C-202ENST00000318024 YEATS4O95619 227 aa18.21■□□□□ 0.51
USH1C-202ENST00000318024 PNMA6AP0CW24 399 aaPredicted RBP18.21■□□□□ 0.51
USH1C-202ENST00000318024 NLRP12P59046 1061 aa18.21■□□□□ 0.51
USH1C-202ENST00000318024 PPP4CP60510 307 aa18.21■□□□□ 0.51
USH1C-202ENST00000318024 ETF1P62495 437 aaKnown RBP18.21■□□□□ 0.51
USH1C-202ENST00000318024 NFXL1Q6ZNB6 911 aa18.21■□□□□ 0.51
USH1C-202ENST00000318024 SDF4Q9BRK5 362 aa18.21■□□□□ 0.51
USH1C-202ENST00000318024 MYL10Q9BUA6 226 aa18.21■□□□□ 0.51
USH1C-202ENST00000318024 RNF41Q9H4P4 317 aaPredicted RBP18.21■□□□□ 0.51
USH1C-202ENST00000318024 POLR3EQ9NVU0 708 aa18.21■□□□□ 0.51
USH1C-202ENST00000318024 CLIC4Q9Y696 253 aa18.21■□□□□ 0.51
USH1C-202ENST00000318024 BAZ2AQ9UIF9 1905 aaKnown RBP18.21■□□□□ 0.51
USH1C-202ENST00000318024 PPIP5K2O43314 1243 aa18.21■□□□□ 0.5
USH1C-202ENST00000318024 RANBP6O60518 1105 aaKnown RBP18.21■□□□□ 0.5
USH1C-202ENST00000318024 SFPQP23246 707 aaKnown RBP eCLIP18.21■□□□□ 0.5
USH1C-202ENST00000318024 TMED8Q6PL24 325 aaPredicted RBP18.21■□□□□ 0.5
USH1C-202ENST00000318024 UBXN6Q9BZV1 441 aa18.21■□□□□ 0.5
USH1C-202ENST00000318024 MKRN1Q9UHC7 482 aaKnown RBP18.21■□□□□ 0.5
USH1C-202ENST00000318024 HPS5Q9UPZ3 1129 aa18.21■□□□□ 0.5
USH1C-202ENST00000318024 DAGLAQ9Y4D2 1042 aa18.21■□□□□ 0.5
USH1C-202ENST00000318024 CCDC88AQ3V6T2 1871 aa18.21■□□□□ 0.5
USH1C-202ENST00000318024 AXDND1Q5T1B0 1012 aaPredicted RBP18.2■□□□□ 0.5
USH1C-202ENST00000318024 KIAA0825Q8IV33 1275 aa18.2■□□□□ 0.5
USH1C-202ENST00000318024 TEX11Q8IYF3 940 aa18.2■□□□□ 0.5
USH1C-202ENST00000318024 LY9Q9HBG7 655 aa18.2■□□□□ 0.5
USH1C-202ENST00000318024 WDR19Q8NEZ3 1342 aa18.2■□□□□ 0.5
USH1C-202ENST00000318024 DYNLL2Q96FJ2 89 aa18.19■□□□□ 0.5
USH1C-202ENST00000318024 TMEM87BQ96K49 555 aa18.19■□□□□ 0.5
USH1C-202ENST00000318024 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
USH1C-202ENST00000318024 IKBKBO14920 756 aa18.19■□□□□ 0.5
USH1C-202ENST00000318024 SMC2O95347 1197 aa18.19■□□□□ 0.5
USH1C-202ENST00000318024 RHBDL3P58872 404 aa18.19■□□□□ 0.5
USH1C-202ENST00000318024 MICU3Q86XE3 530 aa18.19■□□□□ 0.5
USH1C-202ENST00000318024 SLF2Q8IX21 1173 aa18.19■□□□□ 0.5
USH1C-202ENST00000318024 KCNG4Q8TDN1 519 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms