RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FBXO2Q9UK22 296 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 EIF3HO15372 352 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 GTPBP6O43824 516 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 HAND2P61296 217 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 NEDD9Q14511 834 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 TMEM67Q5HYA8 995 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 ZNF512BQ96KM6 892 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 ALS2CR12Q96Q35 445 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 CDC5LQ99459 802 aaKnown RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 SLC52A2Q9HAB3 445 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 ABHD10Q9NUJ1 306 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 CDHR2Q9BYE9 1310 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 MON2Q7Z3U7 1717 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 MED1Q15648 1581 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 GPAA1O43292 621 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 CHRM1P11229 460 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 COPB1P53618 953 aaKnown RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 SPA17Q15506 151 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 CHST3Q7LGC8 479 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 FAM114A1Q8IWE2 563 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 TRMT44Q8IYL2 757 aaKnown RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 NOA1Q8NC60 698 aaKnown RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 CLIC6Q96NY7 704 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 DONSONQ9NYP3 566 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 LRRIQ3A6PVS8 624 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 APPP05067 770 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 DNM2P50570 870 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 TIMM10P62072 90 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 CDK17Q00537 523 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 GOLGA8FQ08AF8 430 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 GOLGA8DPQ0D2H9 430 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 ATG9AQ7Z3C6 839 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 ANKRD18AQ8IVF6 992 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 STK11IPQ8N1F8 1099 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 ZNF496Q96IT1 587 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 SH3GL2Q99962 352 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 SLF1Q9BQI6 1058 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 RGPD1P0DJD0 1748 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 LRRC37A3O60309 1634 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 BTBD18B2RXH4 712 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 IFIT3O14879 490 aaKnown RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 LTKP29376 864 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 FAM69CQ0P6D2 419 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 MTF1Q14872 753 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 KIAA1328Q86T90 577 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 SLC26A6Q9BXS9 759 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 RNF26Q9BY78 433 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 MAGEC2Q9UBF1 373 aaPredicted RBP5.37□□□□□ -1.55
PTPN13-201ENST00000316707 CEP83Q9Y592 693 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 TEX33O43247 280 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 HSF2BPO75031 334 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 PPFIA3O75145 1194 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 GNAT2P19087 354 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 ERCC3P19447 782 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 NTRK3Q16288 839 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 KLHL10Q6JEL2 608 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 JAKMIP2Q96AA8 810 aa5.37□□□□□ -1.55
PTPN13-201ENST00000316707 ACTN4O43707 911 aaKnown RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 GYPCP04921 128 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 NT5C2P49902 561 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 CASP7P55210 303 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 ZBED6P86452 979 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 DDR1Q08345 913 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 PAK1Q13153 545 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 RTN1Q16799 776 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 RRAGBQ5VZM2 374 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 AIDAQ96BJ3 306 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 DNAJC7Q99615 494 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 ACTR5Q9H9F9 607 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 GPHNQ9NQX3 736 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 PSMA7O14818 248 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 MEFVO15553 781 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 FSBPO95073 299 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 MYL6BP14649 208 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 CCT5P48643 541 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 GNGT1P63211 74 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 ZNF827Q17R98 1081 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 FIGNQ5HY92 759 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 ARHGAP27Q6ZUM4 889 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 SND1Q7KZF4 910 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 APTXQ7Z2E3 356 aaKnown RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 CXorf56Q9H5V9 222 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 LIG3P49916 1009 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 TRIM28Q13263 835 aaKnown RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 KRT31Q15323 416 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 CFAP58Q5T655 872 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 SELENOOQ9BVL4 669 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 STRN4Q9NRL3 753 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 TOMM22Q9NS69 142 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 AK9Q5TCS8 1911 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 A0A1B0GUA9 196 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 N4BP1O75113 896 aaKnown RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 GCP02774 474 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 FXR1P51114 621 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 SECISBP2LQ93073 1101 aaKnown RBP5.36□□□□□ -1.55
PTPN13-201ENST00000316707 CCDC42Q96M95 316 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 NDUFB9Q9Y6M9 179 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 CALM1P0DP23 149 aa5.36□□□□□ -1.55
PTPN13-201ENST00000316707 CALM2P0DP24 149 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms