RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 LRRC37AA6NMS7 1700 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 ORC4O43929 436 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 NPY5RQ15761 445 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 CCDC88AQ3V6T2 1871 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 SBK1Q52WX2 424 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 CCDC183Q5T5S1 534 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 SCAND2PQ9GZW5 306 aaPredicted RBP8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 ECM29Q5VYK3 1845 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 FSIP1Q8NA03 581 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 ZSCAN16Q9H4T2 348 aaPredicted RBP8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 RCOR1Q9UKL0 485 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 USP17L5A8MUK1 530 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 GSTO1P78417 241 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 RRP1BQ14684 758 aaKnown RBP8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 CCDC84Q86UT8 332 aaPredicted RBP8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 ZNF444Q8N0Y2 327 aaPredicted RBP8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 FAM198AQ9UFP1 575 aa8.11□□□□□ -1.11
LYSMD3-201ENST00000315948 CNTNAP5Q8WYK1 1306 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 DDX60LQ5H9U9 1706 aaKnown RBP8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 BIN1O00499 593 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 FOXN1O15353 648 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 GDF11O95390 407 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 MMP1P03956 469 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 SNAP25P60880 206 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 STK38Q15208 465 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 TMTC3Q6ZXV5 915 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 LUZP1Q86V48 1076 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 USP25Q9UHP3 1055 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 MAD2L2Q9UI95 211 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 PSMD14O00487 310 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 MPHOSPH10O00566 681 aaKnown RBP8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 ANO1Q5XXA6 986 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 ZSCAN29Q8IWY8 852 aaPredicted RBP8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 MAP3K14Q99558 947 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 FUCA2Q9BTY2 467 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 TSPY26PQ9H489 355 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 FZD1Q9UP38 647 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 CDK5RAP2Q96SN8 1893 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 TCP10L2B9ZVM9 353 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 CDC25AP30304 524 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 SLC16A2P36021 539 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 PRELPP51888 382 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 AXDND1Q5T1B0 1012 aaPredicted RBP8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 TMX4Q9H1E5 349 aaPredicted RBP8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 NUP62CLQ9H1M0 184 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 KAT14Q9H8E8 782 aa8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 ASTN2O75129 1339 aaPredicted RBP8.1□□□□□ -1.11
LYSMD3-201ENST00000315948 LDHCP07864 332 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 TTBK2Q6IQ55 1244 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 STYK1Q6J9G0 422 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 C16orf86Q6ZW13 317 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 GRAMD1CQ8IYS0 662 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 TTLL6Q8N841 843 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 NLGN2Q8NFZ4 835 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 TEKT1Q969V4 418 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 TNMDQ9H2S6 317 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 ELP1O95163 1332 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 SPTLC2O15270 562 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 PTMSP20962 102 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 CASP1P29466 404 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 SHMT1P34896 483 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 PTPAQ15257 358 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 L1TD1Q5T7N2 865 aaKnown RBP8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 SHC4Q6S5L8 630 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 NOSTRINQ8IVI9 506 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 TRIM22Q8IYM9 498 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 PDILTQ8N807 584 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 TBC1D22AQ8WUA7 517 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 RRAGDQ9NQL2 400 aaPredicted RBP8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 ISY1Q9ULR0 285 aaKnown RBP8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 DNAH12Q6ZR08 3092 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 KIAA2012Q0VF49 1180 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 RBM26Q5T8P6 1007 aaKnown RBP8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 LARGE2Q8N3Y3 721 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 DNAJC25Q9H1X3 360 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 RTEL1Q9NZ71 1219 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 CFAP45Q9UL16 551 aa8.09□□□□□ -1.11
LYSMD3-201ENST00000315948 CDKL5O76039 1030 aa8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 U2AF2P26368 475 aaKnown RBP eCLIP8.09□□□□□ -1.123e-31■■■■■ 109.2
LYSMD3-201ENST00000315948 RASSF7Q02833 373 aa8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 CPLX2Q6PUV4 134 aaKnown RBP8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 DLK2Q6UY11 383 aa8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 C11orf57Q6ZUT1 292 aaPredicted RBP8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 PODNQ7Z5L7 613 aa8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 ENGASEQ8NFI3 743 aa8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 CTCFLQ8NI51 663 aaPredicted RBP8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 CNKSR1Q969H4 720 aa8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 FAM163AQ96GL9 167 aaPredicted RBP8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 ZNF830Q96NB3 372 aaPredicted RBP8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 NUP88Q99567 741 aaPredicted RBP8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 OSBPL5Q9H0X9 879 aaPredicted RBP8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 GPCPD1Q9NPB8 672 aa8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 CLIP2Q9UDT6 1046 aa8.09□□□□□ -1.12
LYSMD3-201ENST00000315948 DEXIO95424 95 aa8.08□□□□□ -1.12
LYSMD3-201ENST00000315948 TRIM29Q14134 588 aa8.08□□□□□ -1.12
LYSMD3-201ENST00000315948 ZNF174Q15697 407 aa8.08□□□□□ -1.12
LYSMD3-201ENST00000315948 PTPN21Q16825 1174 aa8.08□□□□□ -1.12
LYSMD3-201ENST00000315948 KCTD1Q719H9 257 aa8.08□□□□□ -1.12
LYSMD3-201ENST00000315948 MIGA2Q7L4E1 593 aa8.08□□□□□ -1.12
LYSMD3-201ENST00000315948 SLC3A2P08195 630 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms